An Aging and Senescence-Related Gene Signature for Prognosis Prediction in Clear Cell Renal Cell Carcinoma

被引:2
|
作者
Li, Jiaying [1 ]
Gui, Chengpeng [1 ]
Yao, Haohua [1 ]
Luo, Chenggong [1 ]
Song, Hongde [1 ]
Lin, Haishan [1 ]
Xu, Quanhui [1 ]
Chen, Xu [1 ]
Huang, Yong [1 ]
Luo, Junhang [1 ,2 ]
Chen, Wei [1 ]
机构
[1] Sun Yat Sen Univ, Affiliated Hosp 1, Dept Urol, Guangzhou, Peoples R China
[2] Sun Yat Sen Univ, Affiliated Hosp 1, Inst Precis Med, Guangzhou, Peoples R China
基金
中国国家自然科学基金;
关键词
aging; senescence; clear cell renal cell carcinoma; The Cancer Genome Atlas; mRNAs; prognostic model; SIGNALING PATHWAY; RISK SIGNATURE; EXPRESSION; CANCER; BETA; VASOHIBIN-1; PROMOTES; IL-10;
D O I
10.3389/fgene.2022.871088
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background: Clear cell renal cell carcinoma (ccRCC) is the most common solid lesion in the kidney. This study aims to establish an aging and senescence-related mRNA model for risk assessment and prognosis prediction in ccRCC patients.Methods: ccRCC data were obtained from The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) datasets. By applying univariate Cox regression, least absolute shrinkage and selection operator (LASSO), and multivariate Cox regression, a new prognostic model based on aging and senescence-related genes (ASRGs) was established. Depending on the prognostic model, high- and low-risk groups were identified for further study. The reliability of the prediction was evaluated in the validation cohort. Pan-cancer analysis was conducted to explore the role of GNRH1 in tumors.Results: A novel prognostic model was established based on eight ASRGs. This model was an independent risk factor and significantly correlated with the prognosis and clinicopathological features of ccRCC patients. The high- and low-risk groups exhibited distinct modes in the principal component analysis and different patterns in immune infiltration. Moreover, the nomogram combining risk score and other clinical factors showed excellent predictive ability, with AUC values for predicting 1-, 3-, and 5-year overall survival in the TCGA cohort equal to 0.88, 0.82, and 0.81, respectively.Conclusion: The model and nomogram based on the eight ASRGs had a significant value for survival prediction and risk assessment for ccRCC patients, providing new insights into the roles of aging and senescence in ccRCC.
引用
收藏
页数:15
相关论文
共 50 条
  • [1] Analysis of metabolism-related gene signature for prognosis prediction of clear cell renal cell carcinoma.
    Cao, Dalong
    Liao, Yuchen
    Wang, Guoqiang
    Cai, Shangli
    Shi, Guohai
    [J]. JOURNAL OF CLINICAL ONCOLOGY, 2021, 39 (15)
  • [2] A novel ferroptosis-related gene signature associated with cell cycle for prognosis prediction in patients with clear cell renal cell carcinoma
    Chen, Siteng
    Zhang, Encheng
    Guo, Tuanjie
    Shao, Jialiang
    Wang, Tao
    Zhang, Ning
    Wang, Xiang
    Zheng, Junhua
    [J]. BMC CANCER, 2022, 22 (01)
  • [3] A novel ferroptosis-related gene signature associated with cell cycle for prognosis prediction in patients with clear cell renal cell carcinoma
    Siteng Chen
    Encheng Zhang
    Tuanjie Guo
    Jialiang Shao
    Tao Wang
    Ning Zhang
    Xiang Wang
    Junhua Zheng
    [J]. BMC Cancer, 22
  • [4] Comprehensive analysis of cellular senescence-related genes in the prognosis, tumor microenvironment, and immunotherapy/chemotherapy of clear cell renal cell carcinoma
    Lu, Caibao
    Wang, Yiqin
    Nie, Ling
    Chen, Liping
    Li, Moqi
    Qing, Huimin
    Li, Sisi
    Wu, Shuang
    Wang, Zhe
    [J]. FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [5] A novel gene signature related to oxidative stress predicts the prognosis in clear cell renal cell carcinoma
    Ma, Sheng
    Ge, Yue
    Xiong, Zezhong
    Wang, Yanan
    Li, Le
    Chao, Zheng
    Li, Beining
    Zhang, Junbiao
    Ma, Siquan
    Xiao, Jun
    Liu, Bo
    Wang, Zhihua
    [J]. PEERJ, 2023, 11
  • [6] Cellular senescence-related gene signature as a valuable predictor of prognosis in hepatocellular carcinoma
    Zhang, Shuqiao
    Zheng, Yilu
    Li, Xinyu
    Zhang, Shijun
    Hu, Hao
    Kuang, Weihong
    [J]. AGING-US, 2023, 15 (08): : 3064 - 3093
  • [7] Identification of a Glucose Metabolism-related Signature for prediction of Clinical Prognosis in Clear Cell Renal Cell Carcinoma
    Wang, Sheng
    Zhang, Ling
    Yu, Zhihong
    Chai, Kequn
    Chen, Jiabin
    [J]. JOURNAL OF CANCER, 2020, 11 (17): : 4996 - 5006
  • [8] Construction of the metabolic reprogramming-associated gene signature for clear cell renal cell carcinoma prognosis prediction
    Rongfen Tai
    Jinjun Leng
    Wei Li
    Yuerong Wu
    Junfeng Yang
    [J]. BMC Urology, 23
  • [9] Construction of the metabolic reprogramming-associated gene signature for clear cell renal cell carcinoma prognosis prediction
    Tai, Rongfen
    Leng, Jinjun
    Li, Wei
    Wu, Yuerong
    Yang, Junfeng
    [J]. BMC UROLOGY, 2023, 23 (01)
  • [10] Identification of a novel PANoptosis-related gene signature for predicting the prognosis in clear cell renal cell carcinoma
    Yue, Dezhi
    Ren, Congzhe
    Li, Hu
    Liu, Xiaoqiang
    [J]. MEDICINE, 2024, 103 (39)