From network reliability to the Ising model: A parallel scheme for estimating the joint density of states

被引:11
|
作者
Ren, Yihui [1 ]
Eubank, Stephen [1 ,2 ,3 ]
Nath, Madhurima [1 ,2 ]
机构
[1] Virginia Tech, Biocomplex Inst, Network Dynam & Simulat Sci Lab, Blacksburg, VA 24061 USA
[2] Virginia Tech, Dept Phys, Blacksburg, VA 24061 USA
[3] Virginia Tech, Dept Populat Hlth Sci, Blacksburg, VA 24061 USA
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
MONTE-CARLO SIMULATIONS; STATISTICAL PHYSICS; POTTS-MODEL; SEGREGATION; ALGORITHM; PROTEIN;
D O I
10.1103/PhysRevE.94.042125
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
Network reliability is the probability that a dynamical system composed of discrete elements interacting on a network will be found in a configuration that satisfies a particular property. We introduce a reliability property, Ising feasibility, for which the network reliability is the Ising model's partition function. As shown by Moore and Shannon, the network reliability can be separated into two factors: structural, solely determined by the network topology, and dynamical, determined by the underlying dynamics. In this case, the structural factor is known as the joint density of states. Using methods developed to approximate the structural factor for other reliability properties, we simulate the joint density of states, yielding an approximation for the partition function. Based on a detailed examination of why naive Monte Carlo sampling gives a poor approximation, we introduce a parallel scheme for estimating the joint density of states using a Markov-chain Monte Carlo method with a spin-exchange random walk. This parallel scheme makes simulating the Ising model in the presence of an external field practical on small computer clusters for networks with arbitrary topology with similar to 10(6) energy levels and more than 10(308) microstates.
引用
收藏
页数:7
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