Complete plastid genome sequences of two species of the Neotropical genus Brunellia (Brunelliaceae)

被引:4
|
作者
Valencia-D, Janice [1 ]
Murillo-A, Jose [2 ]
Ines Orozco, Clara [2 ]
Parra-O, Carlos [2 ]
Neubig, Kurt M. [1 ]
机构
[1] Southern Illinois Univ Carbondale, Sch Biol Sci, Carbondale, IL 62901 USA
[2] Univ Nacl Colombia, Inst Ciencias Nat, Bogota, Colombia
来源
PEERJ | 2020年 / 8卷
关键词
Brunellia; Brunelliaceae; COM group; Fabids; Oxalidales; Plastid genome; Plastome; Rosid clade; Andean trees; PHYLOGENETIC ANALYSIS; NUCLEAR GENES; IQ-TREE; DIVERSIFICATION; ANGIOSPERMS; SCALE; RATES; MITOCHONDRIAL; REPEAT; PLANTS;
D O I
10.7717/peerj.8392
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Here we present the first two complete plastid genomes for Brunelliaceae, a Neotropical family with a single genus, Brunellia. We surveyed the entire plastid genome in order to find variable cpDNA regions for further phylogenetic analyses across the family. We sampled morphologically different species, B. antioquensis and B. trianae, and found that the plastid genomes are 157,685 and 157,775 bp in length and display the typical quadripartite structure found in angiosperms. Despite the clear morphological distinction between both species, the molecular data show a very low level of divergence. The amount of nucleotide substitutions per site is one of the lowest reported to date among published congeneric studies (pi = 0.00025). The plastid genomes have gene order and content coincident with other COM (Celastrales, Oxalidales, Malpighiales) relatives. Phylogenetic analyses of selected superrosid representatives show high bootstrap support for the ((C,M)O) topology. The N-fixing dade appears as the sister group of the COM dade and Zygophyllales as the sister to the rest of the fabids group.
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页数:19
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