Patterns for four-allele population genetics model

被引:2
|
作者
Su, Linlin [1 ]
Lui, Roger [1 ]
机构
[1] Worcester Polytech Inst, Dept Math Sci, Worcester, MA 01609 USA
关键词
k-allele model; Asymptotically stable equilibrium; Pattern; Eigenvalue; Computer simulation; ESSS;
D O I
10.1016/j.tpb.2012.02.002
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
In this paper, we find and classify all existing patterns for a single-locus four-allele population genetics models in continuous time. An existing pattern for a k-allele model means a set of all coexisting asymptotically stable equilibria with respect to the flow defined by the system of equations p(i) = p(i)(r(i)-r), i = 1,..., k, where p(i) and r(i) are the frequency and marginal fitness of allele A(i), respectively, and r is the mean fitness of the population. It is well known that for the two-allele model there are only three existing patterns, depending on the relative fitness between the homozygotes and the heterozygote. For the three-allele model there are 14 existing patterns, and we shall show in this paper that for the four-allele model there are 117 existing patterns. We also describe the domains of attraction for coexisting asymptotically stable equilibria. The problem of finding existing patterns has been studied in the past, and it is an important problem because the results can be used to predict the long-term genetic makeup of a population. It should be pointed out that this continuous-time model is only an approximation to the corresponding discrete-time model. However, the set of equilibria and their stability properties are the same for the two models. (C) 2012 Elsevier Inc. All rights reserved.
引用
收藏
页码:273 / 283
页数:11
相关论文
共 50 条
  • [1] The retreat of the less fit allele in a population-controlled model for population genetics
    Weinberger, Hans F.
    [J]. JOURNAL OF MATHEMATICAL BIOLOGY, 2014, 68 (05) : 1295 - 1316
  • [2] The retreat of the less fit allele in a population-controlled model for population genetics
    Hans F. Weinberger
    [J]. Journal of Mathematical Biology, 2014, 68 : 1295 - 1316
  • [3] Infinite-allele model and infinite-site model in population genetics
    Tajima, F
    [J]. JOURNAL OF GENETICS, 1996, 75 (01) : 27 - 31
  • [4] Erratum to: The retreat of the less fit allele in a population-controlled model for population genetics
    Hans F. Weinberger
    [J]. Journal of Mathematical Biology, 2013, 67 (3) : 737 - 737
  • [5] Advance of advantageous genes for a multiple-allele population genetics model
    Su, Linlin
    Lui, Roger
    [J]. JOURNAL OF THEORETICAL BIOLOGY, 2012, 315 : 1 - 8
  • [6] Collaboration patterns in theoretical population genetics
    Kretschmer, H
    Gupta, BM
    [J]. SCIENTOMETRICS, 1998, 43 (03) : 455 - 462
  • [7] Collaboration patterns in theoretical population genetics
    Hildrun Kretschmer
    B. M. Gupta
    [J]. Scientometrics, 1998, 43 : 455 - 462
  • [8] 25 YEARS AGO IN GENETICS - THE INFINITE ALLELE MODEL
    CROW, JF
    [J]. GENETICS, 1989, 121 (04) : 631 - 634
  • [9] The nk model and population genetics
    Welch, JJ
    Waxman, D
    [J]. JOURNAL OF THEORETICAL BIOLOGY, 2005, 234 (03) : 329 - 340
  • [10] Highlighting nonlinear patterns in population genetics datasets
    Alanis-Lobato, Gregorio
    Cannistraci, Carlo Vittorio
    Eriksson, Anders
    Manica, Andrea
    Ravasi, Timothy
    [J]. SCIENTIFIC REPORTS, 2015, 5