Improved Firefly Optimization for Pairwise Network Alignment with its Biological Significance of Predicting GO Functions and KEGG Pathways

被引:0
|
作者
Ranjani Rani, R. [1 ]
Ramyachitra, D. [2 ]
机构
[1] PSG Coll Arts & Sci, Dept Comp Sci, Coimbatore, Tamil Nadu, India
[2] Bharathiar Univ, Dept Comp Sci, Coimbatore, Tamil Nadu, India
关键词
Protein network alignment; IFOA method; Synthetic networks; Real-world networks; Symmetric substructure score; Gene-ontology Precision; PROTEIN-INTERACTION NETWORKS; GLOBAL ALIGNMENT; INTERACTION DATABASE; MAXIMIZING ACCURACY;
D O I
10.1007/s11277-021-08851-z
中图分类号
TN [电子技术、通信技术];
学科分类号
0809 ;
摘要
Global pairwise biological network alignment is a pervasive technique in bioinformatics and computational biology. Even now, the computation of network alignment is a challenging effort for delivering an efficient and statistically significant results. Thus, the optimization algorithms have been used to get the precise results of protein network alignment. In this work, an Improved Firefly Optimization Algorithm method was used to align the biological protein networks in a pairwise technique which resulted in an optimal solution. By utilizing the final outcome of network alignment, the function of proteins in a network and KEGG pathways was also obtained and found that the aligned proteins have more functions that are common in nature.
引用
收藏
页码:2823 / 2844
页数:22
相关论文
共 2 条