TOF-SIMS imaging technique with information entropy

被引:20
|
作者
Aoyagi, S
Kawashima, Y
Kudo, M
机构
[1] Shimane Univ, Dept Reg Dev, Matsue, Shimane 6908504, Japan
[2] Seikei Univ, Dept Appl Phys, Tokyo 1808633, Japan
关键词
TOF-SIMS; chemical imaging; information entropy; protein;
D O I
10.1016/j.nimb.2005.03.037
中图分类号
TH7 [仪器、仪表];
学科分类号
0804 ; 080401 ; 081102 ;
摘要
Time-of-flight secondary ion mass spectrometry (TOF-SIMS) is capable of chemical imaging of proteins on insulated samples in principal. However, selection of specific peaks related to a particular protein, which are necessary for chemical imaging, out of numerous candidates had been difficult without an appropriate spectrum analysis technique. Therefore multivariate analysis techniques, such as principal component analysis (PCA), and analysis with mutual information defined by information theory, have been applied to interpret SIMS spectra of protein samples. In this study mutual information was applied to select specific peaks related to proteins in order to obtain chemical images. Proteins on insulated materials were measured with TOF-SIMS and then SIMS spectra were analyzed by means of the analysis method based on the comparison using mutual information. Chemical mapping of each protein was obtained using specific peaks related to each protein selected based on values of mutual information. The results of TOF-SIMS images of proteins on the materials provide some useful information on properties of protein adsorption, optimality of immobilization processes and reaction between proteins. Thus chemical images of proteins by TOF-SIMS contribute to understand interactions between material surfaces and proteins and to develop sophisticated biomaterials. (c) 2005 Elsevier B.V. All rights reserved.
引用
收藏
页码:146 / 152
页数:7
相关论文
共 50 条
  • [1] Interpretation of TOF-SIMS data based on information entropy of spectra
    Aoyagi, Satoka
    Mizomichi, Keisuke
    Kamochi, Keisuke
    Miisho, Ako
    [J]. SURFACE AND INTERFACE ANALYSIS, 2022, 54 (04) : 356 - 362
  • [2] Biomedical studies by TOF-SIMS imaging
    Bich, Claudia
    Touboul, David
    Brunelle, Alain
    [J]. BIOINTERPHASES, 2015, 10 (01)
  • [3] Quantitative TOF-SIMS imaging of DNA microarrays produced by bubble jet printing technique and the role of TOF-SIMS in life science industry
    Hashimoto, H
    Nakamura, K
    Takase, H
    Okamoto, T
    Yamamoto, N
    [J]. APPLIED SURFACE SCIENCE, 2004, 231 : 385 - 391
  • [4] Imaging TOF-SIMS analysis of oligonucleotide microarrays
    Cheran, LE
    Vukovich, D
    Thompson, M
    [J]. ANALYST, 2003, 128 (02) : 126 - 129
  • [5] Advancements in ToF-SIMS imaging for life sciences
    Jia, Feifei
    Zhao, Xia
    Zhao, Yao
    [J]. FRONTIERS IN CHEMISTRY, 2023, 11
  • [6] Characterisation of protein nanotubes by ToF-SIMS imaging
    Poleunis, Claude
    Dupont-Gillain, Christine
    Demoustier-Champagne, Sophie
    Delcorte, Arnaud
    Kalaskar, Deepak
    [J]. SURFACE AND INTERFACE ANALYSIS, 2013, 45 (01) : 333 - 337
  • [7] ToF-SIMS imaging of lipids in cell membranes
    Johansson, Bjorn
    [J]. SURFACE AND INTERFACE ANALYSIS, 2006, 38 (11) : 1401 - 1412
  • [8] Towards quantitative chemical imaging with ToF-SIMS
    Wagner, Matthew S.
    [J]. APPLIED SURFACE SCIENCE, 2008, 255 (04) : 992 - 996
  • [9] ToF-SIMS imaging with cluster ion beams
    Xu, J
    Ostrowski, S
    Szakal, C
    Ewing, AG
    Winograd, N
    [J]. APPLIED SURFACE SCIENCE, 2004, 231 : 159 - 163
  • [10] ToF-SIMS imaging: a valuable chemical microscopy technique for paper and paper coatings
    Fardim, P
    Holmbom, B
    [J]. APPLIED SURFACE SCIENCE, 2005, 249 (1-4) : 393 - 407