A N6-methyladenosine-related long noncoding RNAs model for predicting prognosis in oral squamous cell carcinoma: Association with immune cell infiltration and tumor metastasis

被引:11
|
作者
Yang, Qian [1 ,2 ]
Cheng, Chen [3 ,4 ]
Zhu, Rongrong [3 ,4 ]
Guo, Fangfang [5 ]
Lai, Renfa [1 ,2 ]
Liu, Xiangning [1 ,2 ]
Li, Minmin [5 ]
机构
[1] Jinan Univ, Affiliated Hosp 1, Ctr Stomatol, Guangzhou, Peoples R China
[2] Jinan Univ, Sch Stornatol, Clin Res Platform Interdiscipline Stornatol, Guangzhou, Peoples R China
[3] Southern Med Univ, Sch Pharmaceut Sci, Guangdong Prov Key Lab New Drug Screening, Guangzhou, Peoples R China
[4] Southern Med Univ, Key Lab Drug Metab Res & Evaluat, Guangzhou, Peoples R China
[5] Jinan Univ, Affiliated Hosp 1, Ctr Clin Lab, Guangzhou, Peoples R China
基金
中国国家自然科学基金;
关键词
Oral cancer; m6A; lncRNA; Prognostic model; CANCER; BIOMARKERS; SURVIVAL;
D O I
10.1016/j.oraloncology.2022.105771
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Objectives: We aim to investigate the prognostic value of potential prognostic m6A-related lncRNAs in oral squamous cell carcinoma (OSCC) samples and construct a m6A-related lncRNAs prognostic model of OSCC survival outcomes, find new clues for OSCC prognosis improvement. Materials and methods: Data of m6A-related lncRNAs were obtained from OSCC samples in TCGA database. Prognostic m6A-related lncRNAs were selected by univariate Cox regression analysis. M6A-related lncRNAs prognostic signature was analyzed by least absolute shrinkage and selection operator (LASSO) regression. Results: 271 m6A-related lncRNAs were identified in OSCC lncRNAs, 16 of which were highly correlated with OSCC survival outcomes. Two clusters were created based on 16 prognostic valuable m6A-related lncRNAs. Characteristics of tumor immune and metastasis were identified in cluster 2 and the overall survival (OS) was worse of cluster 2 than that of cluster 1. Eleven m6A-related lncRNAs were selected from prognostic lncRNAs to establish a risk prediction signature via LASSO regression. Results showed that the OS of 1 year was lower in the high-risk group than low-risk group. The area under the curve in the training cohort was 0.704 at 1 year and 0.880 at 5 years. Multivariate Cox regression results suggested that the risk score calculated based on the m6A-related lncRNAs differential expressions was an independent predictor of OS in both two cohorts. Conclusion: We identified prognostic valuable m6A-related lncRNAs and demonstrated a reliable m6A-related lncRNA prognostic model for OSCC patients.
引用
收藏
页数:10
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