The ubiquitous transcription factor CTCF promotes lineage-specific epigenomic remodeling and establishment of transcriptional networks driving cell differentiation

被引:10
|
作者
Dubois-Chevalier, Julie [1 ,2 ,3 ,4 ]
Staels, Bart [1 ,2 ,3 ,4 ]
Lefebvre, Philippe [1 ,2 ,3 ,4 ]
Eeckhoute, Jerome [1 ,2 ,3 ,4 ]
机构
[1] INSERM, UMR U1011, F-59045 Lille, France
[2] Univ Lille, Lille, France
[3] Inst Pasteur, Lille, France
[4] EGID, FR-3508 Lille, France
关键词
CCCTC-binding factor (CTCF); cell differentiation; cistrome; DNA hydroxymethylation; epigenome; enhancer; TET methylcytosine dioxygenase; transcriptome; ubiquitous transcription factor; CTCF; CCCTC-binding factor; KLF; Kruppel-like factors; PPARG; Peroxisome proliferator-activated receptor gamma; CEBP; CCAAT; enhancer binding protein; H3K4me1; monomethylation of histone H3 lysine 4; H3K27ac; acetylation of histone H3 lysine 27; TET; Ten-eleven translocation methylcytosine dioxygenase; TF; Transcription factor; 5mC; 5-methylcytosine; 5hmC; 5-hydroxymethylcytosine; ACTIVATED RECEPTOR-GAMMA; REGULATORY ELEMENTS; ENHANCER ACTIVITY; TET PROTEINS; BINDING; MAP; HYDROXYMETHYLATION; HOTSPOTS; GENES; ROLES;
D O I
10.1080/19491034.2015.1004258
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Cell differentiation relies on tissue-specific transcription factors (TFs) that cooperate to establish unique transcriptomes and phenotypes. However, the role of ubiquitous TFs in these processes remains poorly defined. Recently, we have shown that the CCCTC-binding factor (CTCF) is required for adipocyte differentiation through epigenomic remodelling of adipose tissue-specific enhancers and transcriptional activation of Peroxisome proliferator-activated receptor gamma (PPARG), the main driver of the adipogenic program (PPARG), and its target genes. Here, we discuss how these findings, together with the recent literature, illuminate a functional role for ubiquitous TFs in lineage-determining transcriptional networks.
引用
收藏
页码:15 / 18
页数:4
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