Complete genome sequence of Desulfobulbus propionicus type strain (1pr3T)

被引:38
|
作者
Pagani, Ioanna [2 ]
Lapidus, Alla [2 ]
Nolan, Matt [2 ]
Lucas, Susan [2 ]
Hammon, Nancy [2 ]
Deshpande, Shweta [2 ]
Cheng, Jan-Fang [2 ]
Chertkov, Olga [2 ,3 ]
Davenport, Karen [2 ,3 ]
Tapia, Roxane [2 ,3 ]
Han, Cliff [2 ,3 ]
Goodwin, Lynne [2 ,3 ]
Pitluck, Sam [2 ]
Liolios, Konstantinos [2 ]
Mavromatis, Konstantinos [2 ]
Ivanova, Natalia [2 ]
Mikhailova, Natalia [2 ]
Pati, Amrita [2 ]
Chen, Amy [4 ]
Palaniappan, Krishna [4 ]
Land, Miriam [2 ,5 ]
Hauser, Loren [2 ,5 ]
Chang, Yun-Juan [2 ,5 ]
Jeffries, Cynthia D. [2 ,5 ]
Detter, John C. [2 ,3 ]
Brambilla, Evelyne [1 ]
Kannan, K. Palani [1 ]
Djao, Olivier D. Ngatchou [6 ]
Rohde, Manfred [6 ]
Pukall, Ruediger [1 ]
Spring, Stefan [1 ]
Goeker, Markus [1 ]
Sikorski, Johannes [1 ]
Woyke, Tanja [2 ]
Bristow, James [2 ]
Eisen, Jonathan A. [2 ,7 ]
Markowitz, Victor [4 ]
Hugenholtz, Philip [2 ,8 ]
Kyrpides, Nikos C. [2 ]
Klenk, Hans-Peter [1 ]
机构
[1] DSMZ German Collect Microorganisms & Cell Culture, Braunschweig, Germany
[2] US DOE, Joint Genome Inst, Walnut Creek, CA USA
[3] Los Alamos Natl Lab, Biosci Div, Los Alamos, NM USA
[4] Univ Calif Berkeley, Lawrence Berkeley Lab, Biol Data Management & Technol Ctr, Berkeley, CA 94720 USA
[5] Oak Ridge Natl Lab, Oak Ridge, TN USA
[6] HZI Helmholtz Ctr Infect Res, Braunschweig, Germany
[7] Univ Calif Davis, Genome Ctr, Davis, CA 95616 USA
[8] Univ Queensland, Sch Chem & Mol Biosci, Australian Ctr Ecogenom, Brisbane, Qld, Australia
来源
STANDARDS IN GENOMIC SCIENCES | 2011年 / 4卷 / 01期
关键词
anaerobic; non-motile; Gram-negative; chemoorganotroph; ellipsoidal to lemon-shaped; non spore-forming; mesophilic; Desulfobulbaceae; GEBA; SULFATE-REDUCING BACTERIA; CELLULAR FATTY-ACIDS; ELEMENTAL SULFUR; OXIDATION; SEDIMENTS; ARCHAEA; ABSENCE; DESULFOBACTER; ALGORITHM; DATABASE;
D O I
10.4056/sigs.1613929
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Desulfobulbus propionicus Widdel 1981 is the type species of the genus Desulfobulbus, which belongs to the family Desulfobulbaceae. The species is of interest because of its great implication in the sulfur cycle in aquatic sediments, its large substrate spectrum and a broad versatility in using various fermentation pathways. The species was the first example of a pure culture known to disproportionate elemental sulfur to sulfate and sulfide. This is the first completed genome sequence of a member of the genus Desulfobulbus and the third published genome sequence from a member of the family Desulfobulbaceae. The 3,851,869 bp long genome with its 3,351 protein-coding and 57 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
引用
收藏
页码:100 / 110
页数:11
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