Background-free wide-field fluorescence imaging using edge detection combined with HiLo

被引:5
|
作者
Hu, Yuyao [1 ,2 ,3 ]
Liang, Dong [1 ,2 ,4 ]
Wang, Jing [5 ,6 ]
Xuan, Yaping [1 ,2 ,3 ]
Zhao, Fu [1 ,2 ,3 ]
Liu, Jun [1 ,2 ,3 ]
Li, Ruxin [1 ,2 ,3 ]
机构
[1] Chinese Acad Sci, Shanghai Inst Opt & Fine Mech, State Key Lab High Field Laser Phys, Shanghai 201800, Peoples R China
[2] Chinese Acad Sci, CAS Ctr Excellence Ultraintense Laser Sci, Shanghai Inst Opt & Fine Mech, Shanghai 201800, Peoples R China
[3] Univ Chinese Acad Sci, Univ Ctr Mat Sci & Optoelect Engn, Beijing, Peoples R China
[4] Tongji Univ, Sch Phys Sci & Engn, Shanghai, Peoples R China
[5] Univ Shanghai Sci & Technol, Inst Photon Chips, Shanghai, Peoples R China
[6] Univ Shanghai Sci & Technol, Ctr Artificial Intelligence Nanophoton, Sch Opt Elect & Comp Engn, Shanghai, Peoples R China
基金
中国国家自然科学基金;
关键词
edge detection; HiLo; light sheet microscopy; wide-field fluorescence microscopy; STRUCTURED-ILLUMINATION; MICROSCOPY; DEEP; SPECKLE; LIGHT; CONTRAST;
D O I
10.1002/jbio.202200031
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Fluorescence microscopy has been widely used in the field of biological imaging, but the disturbance of background noise has always been an unavoidable phenomenon. To obtain a background free image, a virtual HiLo based on edge detection (V-HiLo-ED) method for background removing is proposed, which is different from the existing popular software algorithms that obtain the background-free image by subtracting the estimated background, but the background-free image is directly reconstructed by estimating the foreground. Compared with two other popular software-based methods, the wavelet-based background and noise subtraction algorithm (WBNS) and the rolling ball algorithm (RBA), the V-HiLo-ED owns a better quality on achieving background-free imaging. Compared with hardware-based method such as HiLo method, V-HiLo-ED exhibits almost the same performance but faster speed. In combination with light sheet microscopy, the V-HiLo-ED further improves the signal-to-noise ratio of images with thick light-sheet. These experiment results indicate that the V-HiLo-ED owns the potentiality in many other image applications such as endoscopy.
引用
收藏
页数:11
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