Genome sequence of the white-rot fungus Irpex lacteus F17, a type strain of lignin degrader fungus

被引：15
|
作者：
Yao, Mengwei [1 ,2 ]
Li, Wenman [1 ,2 ]
Duan, Zihong [1 ,2 ]
Zhang, Yinliang [1 ,2 ]
Jia, Rong [1 ,2 ]
机构：
[1] Anhui Univ, Sch Life Sci Econ & Technol Dev Zone, 111 Jiulong Rd, Hefei 230601, Anhui, Peoples R China
[2] Anhui Univ, Anhui Key Lab Modern Biomfg, Hefei 230601, Anhui, Peoples R China
来源：
STANDARDS IN GENOMIC SCIENCES | 2017年 / 12卷
基金：
中国国家自然科学基金;
关键词：
Short genome report; Genome sequence; Irpex lacteus F17; White-rot fungus; Hardwood tree; Lignin decomposition; MANGANESE PEROXIDASE; AROMATIC-HYDROCARBONS; DECOLORIZATION; PURIFICATION; DEGRADATION; ANNOTATION; CELLULASE; PROGRAM;
D O I：
10.1186/s40793-017-0267-x
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
Irpex lacteus, a cosmopolitan white-rot fungus, degrades lignin and lignin-derived aromatic compounds. In this study, we report the high-quality draft genome sequence of I. lacteus F17, isolated from a decaying hardwood tree in the vicinity of Hefei, China. The genome is 44,362,654 bp, with a GC content of 49.64% and a total of 10,391 predicted protein-coding genes. In addition, a total of 18 snRNA, 842 tRNA, 15 rRNA operons and 11,710 repetitive sequences were also identified. The genomic data provides insights into the mechanisms of the efficient lignin decomposition of this strain.
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页数：6
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