Distributed processing of biological interactions using Hadoop

被引：0
|
作者：
Auer, Bence [1 ]
Antal, Balint [1 ]
机构：
[1] Univ Debrecen, Fac Informat, POB 12, H-4010 Debrecen, Hungary
来源：
2015 6TH IEEE INTERNATIONAL CONFERENCE ON COGNITIVE INFOCOMMUNICATIONS (COGINFOCOM) | 2015年
关键词：
D O I：
暂无
中图分类号：
TM [电工技术]; TN [电子技术、通信技术];
学科分类号：
0808 ; 0809 ;
摘要：
In this paper, we propose a software to support the functional genomics community in experiment design by allowing them the processing of large-scale gene or protein interactions. The software is written in Python and uses Apache Hadoop as a distributed environment. We show how the software was implemented as well as how it scales with exponentially growing amount of data. The software is open source and is freely available at https://github.com/benauer/Biogrid-Hadoop.
引用
收藏
页码：175 / 178
页数：4
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