Genome-wide analysis of the SBP-box gene family transcription factors and their responses to abiotic stresses in tea (Camellia sinensis)

被引:32
|
作者
Zhang, Dayan [1 ]
Han, Zhaolan [1 ]
Li, Jinqiu [1 ]
Qin, Hao [1 ]
Zhou, Lin [2 ]
Wang, Yuhua [1 ]
Zhu, Xujun [1 ]
Ma, Yuanchun [1 ]
Fang, Wanping [1 ]
机构
[1] Nanjing Agr Univ, Coll Hort, 1 Weigang, Nanjing 210095, Jiangsu, Peoples R China
[2] Shanghai Acad Agr Sci, Forestry & Pomol Res Inst, Shanghai 201403, Peoples R China
基金
中国国家自然科学基金;
关键词
SBP-box; SPL; Tea plant; Heat; Cold; Anthocyanin; ANTHOCYANIN BIOSYNTHESIS; MOLECULAR CHARACTERIZATION; ARABIDOPSIS; PLANT; IDENTIFICATION; TOLERANCE; EXPRESSION; COLOR;
D O I
10.1016/j.ygeno.2019.12.015
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
SQUAMOSA promoter-binding protein (SBP)-box gene family is one kind of plant-specific transcription factor that plays important roles in the process of resisting abiotic stress. The SBP-box gene family has been studied in many species, but their functions are not yet clear in Camellia sinensis var. sinensis (CSS) (tea) plants. In our study, 25 SBP-box genes in the CSS were identified in the reference genome and classified into six groups based on a phylogenetic tree. The expression pattern of CsSBP genes under temperature stresses showed that CsSBPs were involved in the process of resisting temperature stresses. CsSBP8 had a positive effect on the anthocyanin accumulation during high temperature exposures, but CsSBP12 has a high correlation with anthocyanin accumulation during both high and low temperature. This study provides a foundation for the further study of CsSBP genes involved in the anthocyanin biosynthesis pathway during the temperature stress in tea.
引用
收藏
页码:2194 / 2202
页数:9
相关论文
共 50 条
  • [1] Genome-Wide Characterization and Expression Analysis of the SBP-Box Gene Family in Sweet Orange (Citrus sinensis)
    Song, Na
    Cheng, Yulin
    Peng, Weiye
    Peng, ErPing
    Zhao, Zengling
    Liu, Tiantian
    Yi, Tuyong
    Dai, Liangying
    Wang, Bing
    Hong, Yanyun
    [J]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2021, 22 (16)
  • [2] Genome-wide identification and phylogenetic analysis of the SBP-box gene family in melons
    Ma, Y.
    Guo, J. W.
    Bade, R.
    Men, Z. H.
    Hasi, A.
    [J]. GENETICS AND MOLECULAR RESEARCH, 2014, 13 (04): : 8794 - 8806
  • [3] Genome-wide identification and expression analysis of SBP-box gene family reveal their involvement in hormone response and abiotic stresses in Chrysanthemum nankingense
    Li, Ziwei
    Yang, Yujia
    Chen, Bin
    Xia, Bin
    Li, Hongyao
    Zhou, Yunwei
    He, Miao
    [J]. PEERJ, 2022, 10
  • [4] Genome-wide identification and characterization of the SBP-box gene family in Petunia
    Qin Zhou
    Sisi Zhang
    Feng Chen
    Baojun Liu
    Lan Wu
    Fei Li
    Jiaqi Zhang
    Manzhu Bao
    Guofeng Liu
    [J]. BMC Genomics, 19
  • [5] Genome-wide identification and characterization of the SBP-box gene family in Petunia
    Zhou, Qin
    Zhang, Sisi
    Chen, Feng
    Liu, Baojun
    Wu, Lan
    Li, Fei
    Zhang, Jiaqi
    Bao, Manzhu
    Liu, Guofeng
    [J]. BMC GENOMICS, 2018, 19
  • [6] Genome-wide identification, phylogeny, and expression analysis of the SBP-box gene family in Euphorbiaceae
    Jing Li
    Xiaoyang Gao
    Shiye Sang
    Changning Liu
    [J]. BMC Genomics, 20
  • [7] Genome-wide identification, phylogeny, and expression analysis of the SBP-box gene family in Euphorbiaceae
    Li, Jing
    Gao, Xiaoyang
    Sang, Shiye
    Liu, Changning
    [J]. BMC GENOMICS, 2019, 20 (Suppl 9)
  • [8] Genome-Wide Identification and Evolutionary Analysis of the SBP-Box Gene Family in Castor Bean
    Zhang, Shu-Dong
    Ling, Li-Zhen
    [J]. PLOS ONE, 2014, 9 (01):
  • [9] Genome-wide identification, phylogeny, and expression analysis of the SBP-box gene family in grapevine
    Y. Wang
    Z. Hu
    Y. Yang
    X. Chen
    G. Chen
    [J]. Russian Journal of Plant Physiology, 2010, 57 : 273 - 282
  • [10] Genome-wide identification and expression pattern analysis of WRKY transcription factors in response to biotic and abiotic stresses in tea plants ( Camellia sinensis )
    Liu, Nana
    Wu, Feixue
    Li, Caiyun
    Yang, Yi
    Yu, Antai
    Wang, Ziteng
    Zhao, Lei
    Zhang, Xinfu
    Qu, Fengfeng
    Gao, Liping
    Xia, Tao
    Wang, Peiqiang
    [J]. PLANT PHYSIOLOGY AND BIOCHEMISTRY, 2024, 211