Phylogenomic Analyses of Echinodermata Support the Sister Groups of Asterozoa and Echinozoa

被引:70
|
作者
Reich, Adrian [1 ]
Dunn, Casey [2 ]
Akasaka, Koji [3 ]
Wessel, Gary [1 ]
机构
[1] Brown Univ, Dept Mol Biol Cell Biol & Biochem, Providence, RI 02912 USA
[2] Brown Univ, Dept Ecol & Evolutionary Biol, Providence, RI 02912 USA
[3] Univ Tokyo, Misaki Marine Biol Stn, Miura, Kanagawa, Japan
来源
PLOS ONE | 2015年 / 10卷 / 03期
基金
美国国家科学基金会;
关键词
EVOLUTION; TRANSCRIPTOME; INSIGHTS; GENOME; CLASSIFICATION; RECONSTRUCTION; TOPOLOGIES; RESOLUTION; TREE;
D O I
10.1371/journal.pone.0119627
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Echinoderms (sea urchins, sea stars, brittle stars, sea lilies and sea cucumbers) are a group of diverse organisms, second in number within deuterostome species to only the chordates. Echinoderms serve as excellent model systems for developmental biology due to their diverse developmental mechanisms, tractable laboratory use, and close phylogenetic distance to chordates. In addition, echinoderms are very well represented in the fossil record, including some larval features, making echinoderms a valuable system for studying evolutionary development. The internal relationships of Echinodermata have not been consistently supported across phylogenetic analyses, however, and this has hindered the study of other aspects of their biology. In order to test echinoderm phylogenetic relationships, we sequenced 23 de novo transcriptomes from all five clades of echinoderms. Using multiple phylogenetic methods at a variety of sampling depths we have constructed a well-supported phylogenetic tree of Echinodermata, including support for the sister groups of Asterozoa (sea stars and brittle stars) and Echinozoa (sea urchins and sea cucumbers). These results will help inform developmental and evolutionary studies specifically in echinoderms and deuterostomes in general.
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页数:11
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