Drug Discovery for Breast Cancer Based on Big Data Analytics Techniques

被引:0
|
作者
Mennour, Rostom [1 ]
Batouche, Mohamed [2 ]
机构
[1] Constantine 2 Univ Abdelhamid Mehri, Fac NTIC, MISC Lab, Constantine 25000, Algeria
[2] Constantine 2 Univ Abdelhamid Mehri, Fac NTIC, Dept Comp Sci, Constantine 25000, Algeria
关键词
Virtual Screening; Docking; Machine Learning; MapReduce; Mahout; Big Data analytics; Breast Cancer; DOCKING; VALIDATION; MAPREDUCE; TOOL;
D O I
暂无
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
scientific research are nowadays faced to very massive data processing, which consume relatively too much time and effort, that's why researchers have turned to high performance computational (HPC) techniques. In the same context, research on drug discovery has reached a place where it has no choice but using HPC and Big Data Processing Systems to accomplish its objectives in reasonable periods of time, Virtual Screening (VS) is considered as one of the most computationally intensive and heavy process, it plays an important role in designing new drugs and has to be done as fast as possible in order to effectively dock ligands in huge databases to a given protein receptor. On the other hand, breast cancer is one of the most dangerous diseases of world, in the last decade; more than 1.5 million new cases are diagnosed each year, with more than 400 thousands deaths. These statistics give very great importance to drug research for this disease. In this context, and in order to ameliorate the drug designing process for breast cancer, we propose in this work, to use Machine Learning Algorithms that are designed for Big Data analysis on top of MapReduce and Mahout in order to pre-filter the huge set of ligands to effectively do virtual screening for the breast cancer protein receptor.
引用
收藏
页数:6
相关论文
共 50 条
  • [1] Drug Discovery for Breast Cancer Based on Big Data Analytics Techniques
    Mennour, Rostom
    Batouche, Mohamed
    [J]. 2015 5TH INTERNATIONAL CONFERENCE ON INFORMATION & COMMUNICATION TECHNOLOGY AND ACCESSIBILITY (ICTA), 2015,
  • [2] Big Data Analytics for Drug Discovery
    Chan, Keith C. C.
    [J]. 2013 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 2013,
  • [3] The Role of Big Data and Advanced Analytics in Drug Discovery, Development, and Commercialization
    Szlezak, N.
    Evers, M.
    Wang, J.
    Perez, L.
    [J]. CLINICAL PHARMACOLOGY & THERAPEUTICS, 2014, 95 (05) : 492 - 495
  • [4] Big data analytics and knowledge discovery
    Bellatreche, Ladjel
    Mohania, Mukesh
    [J]. CONCURRENCY AND COMPUTATION-PRACTICE & EXPERIENCE, 2016, 28 (15): : 3945 - 3947
  • [5] Big Data Analytics and Knowledge Discovery
    Golfarelli, Matteo
    Wrembel, Robert
    [J]. DATA & KNOWLEDGE ENGINEERING, 2023, 146
  • [6] Big data analytics: six techniques
    Shu, Hong
    [J]. GEO-SPATIAL INFORMATION SCIENCE, 2016, 19 (02) : 119 - 128
  • [7] Techniques for Graph Analytics on Big Data
    Nisar, M. Usman
    Fard, Arash
    Miller, John A.
    [J]. 2013 IEEE INTERNATIONAL CONGRESS ON BIG DATA, 2013, : 255 - 262
  • [8] Big Data Analytics Techniques: A Survey
    Vashisht, Poonam
    Gupta, Vishal
    [J]. 2015 INTERNATIONAL CONFERENCE ON GREEN COMPUTING AND INTERNET OF THINGS (ICGCIOT), 2015, : 264 - 269
  • [9] Transforming cancer drug discovery with Big Data and AI
    Workman, Paul
    Antolin, Albert A.
    Al-Lazikani, Bissan
    [J]. EXPERT OPINION ON DRUG DISCOVERY, 2019, 14 (11) : 1089 - 1095
  • [10] Onotology-Based Service Discovery for Intelligent Big Data Analytics
    Siriweera, T. H. Akila S.
    Paik, Incheon
    Kumara, Banage T. G. S.
    [J]. 2015 IEEE 7TH INTERNATIONAL CONFERENCE ON AWARENESS SCIENCE & TECHNOLOGY (ICAST), 2015, : 66 - 71