Crystal structure of a purine/pyrimidine phosphoribosyltransferase-related protein from Thermus thermophilus HB8

被引:5
|
作者
Rehse, PH [1 ]
Tahirov, TH [1 ]
机构
[1] RIKEN, Harima Inst, Mikazuki, Hyogo 6795148, Japan
关键词
adenosine phosphoribosyltransferase; X-ray;
D O I
10.1002/prot.20624
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Adenine phosphoribosyltransferase (APRTase) is a widely distributed enzyme involved in the salvage of adenine to form an adenine nucleotide. We crystallized and determined the X-ray crystallographic structure of a purinelpyrimidine phosphoribosyltransferase-related protein from the thermophilic bacterium, Thermus thermophilus HB8. The crystal space group was C2 with unit cell. dimensions of a = 167.42 angstrom, b = 61.41 angstrom, c = 102.39 angstrom, beta = 940 degrees. Initial phases were determined to 2.6 angstrom using the multiple wavelength anomalous dispersion method and selenomethionine substituted protein (Se-MAD), and refined using a 1.9 angstrom "native" data set. The asymmetric unit contains two pairs of identical dimers, each related by noncrystallographic two-fold symmetry. The fifth monomer forms a similar dimer across a crystallographic two-fold axis. These dimers appear to be the biological unit with both monomers contributing to an unusual highly charged arginine-rich bridge region separating the two active sites. Comparison with distantly related APRTases reveal similarities and differences of the active site. Proteins 2005;61: 658-665. (c) 2005Wiley-Liss, Inc.
引用
收藏
页码:658 / 665
页数:8
相关论文
共 50 条
  • [1] The crystal structure of hypothetical methyltransferase from Thermus thermophilus HB8
    Sasaki, Chizuko
    Sugiura, Ikuko
    Ebihara, Akio
    Tamura, Takashi
    Sugio, Shigetoshi
    Nagaki, Kenji
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2006, 64 (02) : 552 - 557
  • [2] Crystal structure of a predicted phosphoribosyltransferase (TT1426) from Thermus thermophilus HB8 at 2.01 Å resolution
    Kukimoto-Niino, M
    Shibata, R
    Murayama, K
    Hamana, H
    Nishimoto, M
    Bessho, Y
    Terada, T
    Shirouzu, M
    Kuramitsu, S
    Yokoyama, S
    PROTEIN SCIENCE, 2005, 14 (03) : 823 - 827
  • [3] Crystal structure of the conserved hypothetical protein TTHA 1606 from Thermus thermophilus HB8
    Tomoike, Fumiaki
    Wakamatsu, Taisuke
    Nakagawa, Noriko
    Kuramitsu, Seiki
    Masui, Ryoji
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2009, 76 (01) : 244 - 248
  • [4] Crystal structure of the hypothetical protein TTHA1013 from Thermus thermophilus HB8
    Hattori, M
    Mizohata, E
    Manzoku, M
    Bessho, Y
    Murayama, K
    Terada, T
    Kuramitsu, S
    Shirouzu, M
    Yokoyama, S
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2005, 61 (04) : 1117 - 1120
  • [5] Crystal structure of the GTP-binding protein Obg from Thermus thermophilus HB8
    Kukimoto-Niino, M
    Murayama, K
    Inoue, M
    Terada, T
    Tame, JRH
    Kuramitsu, S
    Shirouzu, M
    Yokoyama, S
    JOURNAL OF MOLECULAR BIOLOGY, 2004, 337 (03) : 761 - 770
  • [6] Crystal structure of a novel polyisoprenoid-binding protein from Thermus thermophilus HB8
    Handa, N
    Terada, T
    Doi-Katayama, Y
    Hirota, H
    Tame, JRH
    Park, SY
    Kuramitsu, S
    Shirouzu, M
    Yokoyama, S
    PROTEIN SCIENCE, 2005, 14 (04) : 1004 - 1010
  • [7] Crystal structure of phenylacetic acid degradation protein PaaG from Thermus thermophilus HB8
    Kichise, Tomoyasu
    Hisano, Tamao
    Takeda, Kazuki
    Miki, Kunio
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2009, 76 (04) : 779 - 786
  • [8] Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8
    Handa, N
    Terada, T
    Kamewari, Y
    Hamana, H
    Tame, JRH
    Park, SY
    Kinoshita, K
    Ota, M
    Nakamura, H
    Kuramitsu, S
    Shirouzu, M
    Yokoyama, S
    PROTEIN SCIENCE, 2003, 12 (08) : 1621 - 1632
  • [9] Crystal structure of ribosomal protein L27 from Thermus thermophilus HB8
    Wang, HF
    Takemoto, CH
    Murayama, K
    Sakai, H
    Tatsuguchi, A
    Terada, T
    Shirouzu, M
    Kuramitsu, S
    Yokoyama, S
    PROTEIN SCIENCE, 2004, 13 (10) : 2806 - 2810
  • [10] Crystal structure of TTHA1429 from Thermus thermophilus HB8
    Yamamura, Akihiro
    Ohtsuka, Jun
    Kubota, Keiko
    Agari, Yoshihiro
    Ebihara, Akio
    Nakagawa, Noriko
    Nagata, Koji
    Tanokura, Masaru
    ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2008, 64 : C290 - C290