Establishing a System for Functional Characterization of Full-Length cDNAs of Camellia sinensis

被引:1
|
作者
Lin, Lin [1 ]
Cai, Weiwei [1 ]
Du, Zhenghua [1 ]
Zhang, Wenjing [2 ]
Xu, Quanming [1 ]
Sun, Weijiang [2 ]
Chen, Mingjie [1 ]
机构
[1] Fujian Agr & Forestry Univ, Fujian Prov Key Lab Haixia Appl Plant Syst Biol, Hort Plant Biol & Metabol Ctr, Haixia Inst Sci & Technol, Fuzhou 350002, Fujian, Peoples R China
[2] Fujian Agr & Forestry Univ, Anxi Coll Tea Sci, Fuzhou 350002, Fujian, Peoples R China
基金
美国国家科学基金会;
关键词
Camellia sinensis; full-length cDNA; normalization; rare genes; gene function; binary vector; heterologous expression; FOX HUNTING SYSTEM; ARABIDOPSIS-THALIANA; GENE-EXPRESSION; COPPER; CONSTRUCTION; DISCOVERY; LIBRARIES; ANNOTATION; CLONING; CLONES;
D O I
10.3390/ijms20235929
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Tea (Camellia sinensis) is enriched with bioactive secondary metabolites, and is one of the most popular nonalcoholic beverages globally. Two tea reference genomes have been reported; however, the functional analysis of tea genes has lagged, mainly due to tea's recalcitrance to genetic transformation and the absence of alternative high throughput heterologous expression systems. A full-length cDNA collection with a streamlined cloning system is needed in this economically important woody crop species. RNAs were isolated from nine different vegetative tea tissues, pooled, then used to construct a normalized full-length cDNA library. The titer of unamplified and amplified cDNA library was 6.89 x 10(6) and 1.8 x 10(10) cfu/mL, respectively; the library recombinant rate was 87.2%. Preliminary characterization demonstrated that this collection can complement existing tea reference genomes and facilitate rare gene discovery. In addition, to streamline tea cDNA cloning and functional analysis, a binary vector (pBIG2113SF) was reengineered, seven tea cDNAs isolated from this library were successfully cloned into this vector, then transformed into Arabidopsis. One FL-cDNA, which encodes a putative P-1B-type ATPase 5 (CsHMA5), was characterized further as a proof of concept. We demonstrated that overexpression of CsHMA5 in Arabidopsis resulted in copper hyposensitivity. Thus, our data demonstrated that this represents an efficient system for rare gene discovery and functional characterization of tea genes. The integration of a tea FL-cDNA collection with efficient cloning and a heterologous expression system would facilitate functional annotation and characterization of tea genes.
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页数:16
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