Time-optimal control of piecewise affine bistable gene-regulatory networks: preliminary results

被引:0
|
作者
Augier, Nicolas [1 ]
Yabo, Agustin Gabriel [1 ]
机构
[1] Univ Cote dAzur, Sorbonne Univ, Biocore Team, Inria,INRAE,CNRS, Sophia Antipolis, France
来源
IFAC PAPERSONLINE | 2021年 / 54卷 / 05期
关键词
Genetic Regulatory Systems; Hybrid systems; Biological systems; Optimal control; Genetic toggle switch; MODELS;
D O I
10.1016/j.ifacol.2021.08.499
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
In this preliminary work we give a geometric characterization of the time-optimal trajectories for a piecewise affine bistable switch. Such hybrid models play a major role in systems biology, as they can expressively account for the behaviors of simple gene-regulatory networks. A key example of these biological circuits is the genetic toggle switch, for which the optimality of a state switch has not been studied to the present day. The main result of this work to prove that the optimal control strategy is a simple bang-bang feedback control law. In opposition to previous works, we show that a time-optimal transition between states should pass by an undifferentiated state, well known in cell biology for playing a major role in fate differentiation of cells. We conclude by showing numerical simulations of optimal trajectories illustrating the structure of the bang-bang optimal control for different scenarios. Copyright (C) 2021 The Authors.
引用
收藏
页码:205 / 210
页数:6
相关论文
共 50 条
  • [1] Time-optimal control of piecewise affine bistable gene-regulatory networks
    Augier, Nicolas
    Yabo, Agustin G.
    [J]. INTERNATIONAL JOURNAL OF ROBUST AND NONLINEAR CONTROL, 2023, 33 (09) : 4967 - 4988
  • [2] Control for synchronization of bistable piecewise affine genetic regulatory networks
    Augier, Nicolas
    Chaves, Madalena
    Gouze, Jean-Luc
    [J]. IFAC PAPERSONLINE, 2021, 54 (17): : 77 - 80
  • [3] On piecewise quadratic Lyapunov functions for piecewise affine models of gene regulatory networks
    Pasquini, Mirko
    Angeli, David
    [J]. 2018 IEEE CONFERENCE ON DECISION AND CONTROL (CDC), 2018, : 1071 - 1076
  • [4] Hierarchical analysis of piecewise affine models of gene regulatory networks
    Laurent Tournier
    Jean-Luc Gouzé
    [J]. Theory in Biosciences, 2008, 127 : 125 - 134
  • [5] Hierarchical analysis of piecewise affine models of gene regulatory networks
    Tournier, Laurent
    Gouze, Jean-Luc
    [J]. THEORY IN BIOSCIENCES, 2008, 127 (02) : 125 - 134
  • [6] Discrete time piecewise affine models of genetic regulatory networks
    R. Coutinho
    B. Fernandez
    R. Lima
    A. Meyroneinc
    [J]. Journal of Mathematical Biology, 2006, 52 : 524 - 570
  • [7] Discrete time piecewise affine models of genetic regulatory networks
    Coutinho, R
    Fernandez, B
    Lima, R
    Meyroneinc, A
    [J]. JOURNAL OF MATHEMATICAL BIOLOGY, 2006, 52 (04) : 524 - 570
  • [8] Piecewise affine neural networks and nonlinear control: stability results
    Lehalle, CA
    Azencott, R
    [J]. NINTH INTERNATIONAL CONFERENCE ON ARTIFICIAL NEURAL NETWORKS (ICANN99), VOLS 1 AND 2, 1999, (470): : 608 - 612
  • [9] TIME-OPTIMAL CONTROL BY MEANS OF NEURAL NETWORKS
    NIESLER, TR
    DUPLESSIS, JJ
    [J]. IEEE CONTROL SYSTEMS MAGAZINE, 1995, 15 (05): : 23 - 33
  • [10] GEOMETRIC METHODS IN TIME-OPTIMAL CONTROL . PRELIMINARY REPORT
    MEEKER, LD
    [J]. NOTICES OF THE AMERICAN MATHEMATICAL SOCIETY, 1970, 17 (01): : 205 - &