High quality reference genome of drumstick tree (Moringa oleifera Lam.), a potential perennial crop

被引：50
|
作者：
Tian Yang [1 ,10 ,13 ,14 ]
Zeng Yan [4 ]
Zhang Jing [8 ]
Yang ChengGuang [9 ]
Yan Liang [1 ,5 ]
Wang XuanJun [13 ,14 ]
Shi ChongYing [2 ]
Xie Jing [3 ]
Dai TianYi [2 ]
Peng Lei [2 ]
Zeng Huan Yu [1 ]
Xu Anni [1 ]
Huang Yewei [13 ,14 ]
Zhang JiaJin [11 ,12 ]
Ma Xiao [13 ,14 ]
Dong Yang [7 ,10 ]
Hao ShuMei [6 ]
Sheng Jun [13 ,14 ]
机构：
[1] Jilin Univ, Coll Life Sci, Changchun 130012, Peoples R China
[2] Yunnan Agr Univ, Coll Food Sci, Kunming 650201, Peoples R China
[3] Yunnan Agr Univ, Coll Anim Sci, Kunming 650201, Peoples R China
[4] Univ Chinese Acad Sci, Coll Life Sci, Beijing 100049, Peoples R China
[5] Puer Inst Puer Tea, Puer 665000, Peoples R China
[6] Yunnan Univ, Sch Agr, Kunming 650091, Peoples R China
[7] Kunming Univ Sci & Technol, Fac Life Sci & Technol, Kunming 650093, Peoples R China
[8] Huazhong Univ Sci & Technol, Coll Life Sci, Wuhan 430074, Peoples R China
[9] Wuhan Univ, Coll Life Sci, Wuhan 430072, Peoples R China
[10] Yunnan Inst Lamu, Kunming 650034, Peoples R China
[11] Yunnan Agr Univ, Sch Sci & Informat Engn, Kunming 650201, Peoples R China
[12] Kunming Inst Zool, State Key Lab Genet Resources & Evolut, Kunming 650223, Peoples R China
[13] Minist Educ, Key Lab Puer Tea Sci, Kunming 650201, Peoples R China
[14] Yunnan Agr Univ, Kunming 650201, Peoples R China
来源：
SCIENCE CHINA-LIFE SCIENCES | 2015年 / 58卷 / 07期
关键词：
genome; drumstick tree; Moringa oleifera; MULTIPLE SEQUENCE ALIGNMENT; MULTIPURPOSE TREE; KAKS-CALCULATOR; GENE ONTOLOGY; SWISS-PROT; RNA; TOOL; ARABIDOPSIS; METABOLISM; DOMAIN;
D O I：
10.1007/s11427-015-4872-x
中图分类号：
Q [生物科学];
学科分类号：
07 ; 0710 ; 09 ;
摘要：
The drumstick tree (Moringa oleifera Lam.) is a perennial crop that has gained popularity in certain developing countries for its high-nutrition content and adaptability to arid and semi-arid environments. Here we report a high-quality draft genome sequence of M. oleifera. This assembly represents 91.78% of the estimated genome size and contains 19,465 protein-coding genes. Comparative genomic analysis between M. oleifera and related woody plant genomes helps clarify the general evolution of this species, while the identification of several species-specific gene families and positively selected genes in M. oleifera may help identify genes related to M. oleifera's high protein content, fast-growth, heat and stress tolerance. This reference genome greatly extends the basic research on M. oleifera, and may further promote applying genomics to enhanced breeding and improvement of M. oleifera.
引用
收藏
页码：627 / 638
页数：12
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