Report on a complete chloroplast genome sequence of wild apple tree, Malus sieversii (Lebed.) M. Roem

被引：1

作者：

Ha, Young-Ho ^{[1
]}

Maisupova, Bagila ^{[2
]}

Choi, Kyung ^{[3
]}

Kim, Hyun-Jun ^{[4
]}

Dosmanvetov, Daniyar ^{[2
]}

Mambetov, Bulkair ^{[5
]}

Utebekova, Ainur ^{[5
]}

Kim, Dong-Kap ^{[1
]}

Chang, Kae Sun ^{[3
]}

Kim, Aleksey ^{[1
]}

Lee, Soo-Rang ^{[1
]}

Oh, Seung Hwan ^{[1
]}

机构：

[1] Korea Natl Arboretum, Forest Biodivers Div, Pocheon Si, Gyeonggi Do, South Korea

[2] Kazakh Res Inst Forestry & Agroforestry, Alma Ata, Kazakhstan

[3] Korea Natl Arboretum, Res Planning & Coordinat Div, Pochon, Gyeonggi Do, South Korea

[4] Natl Inst Forest Sci, Forest Med Resources Res Ctr, Yeongju Si, Gyeongsangbuk D, South Korea

[5] Kazakh Natl Agr Univ, Forest Land Resources & Phytosanit, Alma Ata, Kazakhstan

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 02期

关键词：

Chloroplast genome; Malus sieversii; Malus xdomestica; progenitor species; wild apple tree; GENUS MALUS; DOMESTICA; MILL;

D O I：

10.1080/23802359.2020.1741460

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

We report a complete chloroplast genome sequence of Malus sieversii. The CP genome was 160,223 bp in length with a typical quadripartite structure. Length of large single-copy (LSC) was 88,334 bp, whereas small single-copy (SSC) was 19,179 bp in length. A pair of inverted repeats (IR) were 26,355 bp. In total, 128 genes were found including 83 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis on concatenated data set retrieved from 78 protein-coding genes revealed that M. sieversii was closely related with both M. xdomestica and M. sylvestris.

引用

页码：1504 / 1505

页数：2

共 11 条

[1] Evaluation of the Potential Seed Dispersal Effectiveness of Malus sieversii (Lebed.) M. Roem. by Cattle
Bai, Shilin
Xu, Jiang
Lv, Yaya
Shi, Xiaojun
Tan, Dunyan
DIVERSITY-BASEL, 2023, 15 (12):
[2] The complete chloroplast genome of Malus sieversii (Rosaceae), a wild apple tree in Xinjiang, China
Naizaier, Rouxianguli
Qu, Zezhong
Wu, Songlin
Tian, Xinmin
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 983 - 984
[3] Complete chloroplast genome studies of different apple varieties indicated the origin of modern cultivated apples from Malus sieversii and Malus sylvestris
Li, Xueli
Ding, Zhijie
Miao, Haoyu
Bao, Jinbo
Tian, Xinmin
PEERJ, 2022, 10
[4] Characterizing Water Use Efficiency and Water Deficit Responses in Apple (Malus Xdomestica Borkh. and Malus sieversii Ledeb.) M. Roem.
Bassett, Carole L.
Glenn, D. Michael
Forsline, Philip L.
Wisniewski, Michael E.
Farrell, Robert E., Jr.
HORTSCIENCE, 2011, 46 (08) : 1079 - 1084
[5] The complete chloroplast genome sequence of Paeonia jishanensis (Paeoniaceae), a rare wild tree peony
Zhou, Xiao-Jun
Song, Lin-Lin
Peng, Zheng-Feng
Sun, Shan-Shan
Ya, Hui-Yuan
Cheng, Yan-Wei
Zhang, Yan-Zhao
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 503 - 504
[6] The complete chloroplast genome sequence of wild service tree Sorbus torminalis (L.) Crantz
Bartosz Ulaszewski
Elzbieta Sandurska
Ewa Sztupecka
Jaroslaw Burczyk
Conservation Genetics Resources, 2017, 9 : 419 - 422
[7] The complete chloroplast genome sequence of wild service tree Sorbus torminalis (L.) Crantz
Ulaszewski, Bartosz
Sandurska, Elzbieta
Sztupecka, Ewa
Burczyk, Jaroslaw
CONSERVATION GENETICS RESOURCES, 2017, 9 (03) : 419 - 422
[8] The complete chloroplast genome sequence of Ferula sinkiangensis K. M. Shen, a precious and endangered traditional Chinese medicine
Fan, Congzhao
Wang, Guoping
Qiu, Yuanjin
Zhao, Yaqin
Zhang, Jizhao
Song, Jingyuan
Li, Xiaojin
MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (06): : 1670 - 1672
[9] The complete chloroplast genome sequence of an alpine wildflower, Philadelphus calvescens (Rehd.) S. M. Hwang (Saxifragaceae)
Zhang, Lijun
Zhang, Dequan
MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 13 - 14
[10] The complete chloroplast genome sequence of Styrax wuyuanensis S. M. Hwang (Styracaceae) from Jiangxi Province, China
Zhang, Rui
Fan, Yu
Xu, Ying
Tang, Ming
MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (04): : 1395 - 1396

← 1 2 →