Exploration of electronic properties, radical scavenging activity and QSAR of oxadiazole derivatives by molecular docking and first-principles approaches

被引:7
|
作者
Irfan, Ahmad [1 ]
Imran, Muhammad [1 ]
Al-Sehemi, Abdullah G. [1 ]
Shah, Asma Tufail [2 ]
Hussien, Mohamed [1 ,3 ]
Mumtaz, Muhammad Waseem [4 ]
机构
[1] King Khalid Univ, Coll Sci, Dept Chem, POB 9004, Abha 61413, Saudi Arabia
[2] COMSATS Univ Islamabad, Interdisciplinary Res Ctr Biomed Mat IRCBM, Lahore Campus, Lahore 54600, Pakistan
[3] Agr Res Ctr, Pesticide Formulat Dept, Cent Agr Pesticide Lab, Giza 12618, Egypt
[4] Univ Gujrat, Dept Chem, Gujrat, Pakistan
关键词
Azole derivatives; Antioxidants; Density functional theory; Molecular docking; Quantitative structure-activity relationship; ANTIOXIDANT ACTIVITY; 1,3,4-OXADIAZOLE DERIVATIVES; OXIDATIVE STRESS; DESIGN; ORGANOSELENIUM; ABSORPTION; ANALOGS; SURFACE; DFT;
D O I
10.1016/j.sjbs.2021.08.049
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Eight new oxadiazole derivatives were designed then geometries for ground state were optimized through Density Functional Theory (DFT) at B3LYP/6-31G** level. Single electron transfer mechanism has been studied to understand the antioxidant ability of the oxadiazole derivatives. Then molecular electrostatic potential and quantitative structure-activity relationship (QSAR) was probed. Additionally, we shed light on different molecular descriptors, e.g., electrophilicity(omega), electronegativity(chi), electrophilicity indices(omega i), hardness(eta), softness(mu) and chemical potential(l).The smaller value of ionization potential for 5a is showing that it might be efficient antioxidant candidate. The electrophilic reactive sites in 2a, 3a, 4a, 5a and 7a derivatives might be a good choice for reactivity that would be advantageous to improve the biological activity. The polar surface area of 3a, 4a and 5a derivatives was found < 60 A(2) which is enlightening that these drugs might be suitable as orally active and for brain penetration. First principles calculations and molecular docking results revealed that 5a would lead to superior antioxidant activity. (C) 2021 The Author(s). Published by Elsevier B.V. on behalf of King Saud University.
引用
收藏
页码:7416 / 7421
页数:6
相关论文
共 50 条
  • [1] QSAR study of the DPPH• radical scavenging activity of coumarin derivatives and xanthine oxidase inhibition by molecular docking
    Razo-Hernandez, Rodrigo S.
    Pineda-Urbina, Kayim
    Velazco-Medel, Marlene A.
    Villanueva-Garcia, Manuel
    Teresa Sumaya-Martinez, M.
    Martinez-Martinez, Francisco J.
    Gomez-Sandoval, Zeferino
    [J]. CENTRAL EUROPEAN JOURNAL OF CHEMISTRY, 2014, 12 (10): : 1067 - 1080
  • [2] First-Principles Investigation of the Electronic and Conducting Properties of Oligothienoacenes and their Derivatives
    Huang, Jin-Dou
    Wen, Shu-Hao
    Han, Ke-Li
    [J]. CHEMISTRY-AN ASIAN JOURNAL, 2012, 7 (05) : 1032 - 1040
  • [3] First-principles study on the electronic structure and the ferromagnetic properties of the organic radical DTDA
    Yao, KL
    Luo, SJ
    Liu, ZL
    [J]. PHYSICA B-CONDENSED MATTER, 2003, 325 (1-4) : 380 - 384
  • [4] The structure and electronic properties of dislocations studied by first-principles and molecular dynamics
    Ma, S. Y.
    Zhang, J. X.
    [J]. MOLECULAR SIMULATION, 2016, 42 (02) : 102 - 109
  • [5] Molecular analog of perovskite ferrites: First-principles studies of electronic and magnetic properties
    Wang, Mian
    Wang, Tianyi
    Yuan, Minhui
    Zhang, Qian
    Liu, Shenghua
    Shuai, Jing
    Li, Xiang-Guo
    [J]. PHYSICAL REVIEW B, 2023, 108 (18)
  • [6] Electronic transport properties of silicon carbide molecular junctions: first-principles study
    Mu, Yi
    Zeng, Zhao-Yi
    Cheng, Yan
    Chen, Xiang-Rong
    [J]. RSC ADVANCES, 2016, 6 (94) : 91453 - 91462
  • [7] First-principles study of the electronic structure and transport properties of the CO molecular contact
    Niu Xiu-Ming
    Qi Yuan-Hua
    [J]. ACTA CHIMICA SINICA, 2008, 66 (06) : 652 - 656
  • [8] First-principles investigation of structural and electronic properties of solid cubane and its doped derivatives
    Yildirim, T
    Ciraci, S
    Kiliç, Ç
    Buldum, A
    [J]. PHYSICAL REVIEW B, 2000, 62 (11): : 7625 - 7633
  • [9] Electronic and magnetic properties for Co13 clusters deposited on graphene: A first-principles exploration
    Liu, Lizhao
    Su, Yan
    Gao, Junfeng
    Zhao, Jijun
    [J]. PHYSICA E-LOW-DIMENSIONAL SYSTEMS & NANOSTRUCTURES, 2012, 46 : 6 - 11
  • [10] Electronic transport properties of phosphorene/graphene(silicene/germanene) bilayer heterostructures: A first-principles exploration
    Dai, Xinyue
    Zhang, Lishu
    Jiang, Yanyan
    Li, Hui
    [J]. CERAMICS INTERNATIONAL, 2019, 45 (09) : 11584 - 11590