The first two mitochondrial genomes of wood wasps (Hymenoptera: Symphyta): Novel gene rearrangements and higher-level phylogeny of the basal hymenopterans

被引:18
|
作者
Ma, Yue [1 ,2 ]
Zheng, Bo-ying [1 ,2 ]
Zhu, Jia-chen [1 ,2 ]
van Achterberg, Cornelis [3 ]
Tang, Pu [1 ,2 ]
Chen, Xue-xin [1 ,2 ]
机构
[1] Zhejiang Univ, Inst Insect Sci, State Key Lab Rice Biol, Hangzhou 310058, Zhejiang, Peoples R China
[2] Zhejiang Univ, Inst Insect Sci, Minist Agr, Key Lab Mol Biol Crop Pathogens & Insects, Hangzhou 310058, Zhejiang, Peoples R China
[3] Nat Biodivers Ctr, Dept Terr Zool, Postbus 9517, NL-2300 RA Leiden, Netherlands
基金
国家重点研发计划; 中国国家自然科学基金;
关键词
Mitochondrial genome; Gene rearrangement; Secondary structure; Wood wasps; Tremex; Xiphydria; Phylogeny; EVOLUTIONARY HISTORY; APIS-MELLIFERA; RNA GENES; INSECTA; SEQUENCE; CLASSIFICATION; ORGANIZATION; LINEAGES; SOFTWARE; CHOICE;
D O I
10.1016/j.ijbiomac.2018.11.017
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Symphyta has long been recognized as a paraphyletic grade forming the base of the remaining Hymenopteran, and the superfamily relationships within Symphyta remain controversial. Here, the first two representative mitochondrial genomes from the superfamily Siricoidea and Xiphydrioidea (Hymenoptera: Symphyta) are obtained using next-generation sequencing. The complete mitochondrial genome of Xiphydria sp. is 16,482 bp long with an A + T content of 84.18% while the incomplete one of Tremex columba is 16,847 bp long and A + T content is 81.69%. All 37 typical mitochondrial genes are possessed in both species. The secondary structure of tRNAs and rRNAs for both species are successfully predicted. Compared with the ancestral organization, seven and five tRNA genes are rearranged in mitochondrial genomes of Tremex and Xiphydria, respectively, which are the most rearrangement events within Symphyta. The rearrangement patterns in Tremex and Xiphydria present in this study are all novel to the Symphyta. Phylogenetic relationships among the major lineages of Symphyta are reconstructed using mitochondrial genomes. Both maximum likelihood and Bayesian inference analyses highly support Symphyta is a paraphyletic grade, Xyeloidea + (Tenthredinoidea + (Pamphilioidea + (Xiphydrioidea + (Cephoidea + (Orussoidea + Apocrita))))). (C) 2018 Published by Elsevier B.V.
引用
收藏
页码:1189 / 1196
页数:8
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