Distinct Patterns of Expression and Evolution of Intronless and Intron-Containing Mammalian Genes

被引:108
|
作者
Shabalina, Svetlana A. [1 ]
Ogurtsov, Aleksey Y. [1 ]
Spiridonov, Alexey N. [2 ]
Novichkov, Pavel S. [3 ]
Spiridonov, Nikolay A. [4 ]
Koonin, Eugene V. [1 ]
机构
[1] NIH, Natl Ctr Biotechnol Informat, Natl Lib Med, Bethesda, MD 20892 USA
[2] MIT, Dept Math, Cambridge, MA 02139 USA
[3] Univ Calif Berkeley, Lawrence Berkeley Lab, Berkeley, CA 94720 USA
[4] US FDA, Div Therapeut Prot, Ctr Drug Evaluat & Res, Bethesda, MD 20014 USA
基金
美国国家卫生研究院;
关键词
alternative splicing; intronless genes; monomorphic genes; polymorphic genes; mammalian gene evolution; NETWORK; GENOME; EXPORT; CELLS; RATES;
D O I
10.1093/molbev/msq086
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Comparison of expression levels and breadth and evolutionary rates of intronless and intron-containing mammalian genes shows that intronless genes are expressed at lower levels, tend to be tissue specific, and evolve significantly faster than spliced genes. By contrast, monomorphic spliced genes that are not subject to detectable alternative splicing and polymorphic alternatively spliced genes show similar statistically indistinguishable patterns of expression and evolution. Alternative splicing is most common in ancient genes, whereas intronless genes appear to have relatively recent origins. These results imply tight coupling between different stages of gene expression, in particular, transcription, splicing, and nucleocytosolic transport of transcripts, and suggest that formation of intronless genes is an important route of evolution of novel tissue-specific functions in animals.
引用
收藏
页码:1745 / 1749
页数:5
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