Minimal ensembles of side chain conformers for modeling protein-protein interactions

被引:0
|
作者
Beglov, Dmitri [1 ]
Hall, David [1 ]
Kozakov, Dima [1 ]
Brenke, Ryan [1 ]
Dunbrack, Roland [2 ]
Vajda, Sandor [1 ]
机构
[1] Boston Univ, Dept Biomed Engn, Boston, MA 02215 USA
[2] Fox Chase Canc Ctr, Inst Canc Res, Program Mol & Translat Med, Philadelphia, PA 19111 USA
关键词
D O I
暂无
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
294-COMP
引用
收藏
页数:1
相关论文
共 50 条
  • [1] Minimal ensembles of side chain conformers for modeling protein-protein interactions
    Beglov, Dmitri
    Hall, David R.
    Brenke, Ryan
    Shapovalov, Maxim V.
    Dunbrack, Roland L., Jr.
    Kozakov, Dima
    Vajda, Sandor
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2012, 80 (02) : 591 - 601
  • [2] Exploiting Conformational Ensembles in Modeling Protein-Protein Interactions on the Proteome Scale
    Kuzu, Guray
    Gursoy, Attila
    Nussinov, Ruth
    Keskin, Ozlem
    JOURNAL OF PROTEOME RESEARCH, 2013, 12 (06) : 2641 - 2653
  • [3] Improved side-chain modeling for protein-protein docking
    Wang, C
    Schueler-Furman, O
    Baker, D
    PROTEIN SCIENCE, 2005, 14 (05) : 1328 - 1339
  • [4] Side-Chain Conformational Preferences Govern Protein-Protein Interactions
    Watkins, Andrew M.
    Bonneau, Richard
    Arora, Paramjit S.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2016, 138 (33) : 10386 - 10389
  • [5] Organization of protein-protein interactions in a minimal genome
    Xu, Yu
    Nussinov, Ruth
    Ma, Buyong
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2013, 245
  • [6] Multiscale modeling of protein-protein interactions
    Vakser, Ilya
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2011, 242
  • [7] Role of Disordered Protein Ensembles in Protein-Protein Interactions: Calcineurin as a Model System
    Creamer, Trevor
    BIOPHYSICAL JOURNAL, 2017, 112 (03) : 366A - 366A
  • [8] Modeling protein-protein interactions with continuum electrostatics
    Alexov, Emil G.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2007, 233 : 52 - 52
  • [9] Modeling protein-protein interactions for interaction targets
    Nussinov, Ruth
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2016, 251
  • [10] METHODS OF MOLECULAR MODELING OF PROTEIN-PROTEIN INTERACTIONS
    ZIELENKIEWICZ, P
    RABCZENKO, A
    BIOPHYSICAL CHEMISTRY, 1988, 29 (03) : 219 - 224