Three-dimensional structures of protein-protein complexes in the E-coli PTS

被引:0
|
作者
Peterkofsky, A
Wang, GS
Garrett, DS
Lee, BR
Seok, YJ
Clore, GM
机构
[1] NHLBI, Lab Biochem Genet, NIH, Bethesda, MD 20892 USA
[2] NIDDK, Chem Phys Lab, Bethesda, MD 20892 USA
[3] Seoul Natl Univ, Sch Biol Sci, Seoul 151742, South Korea
关键词
D O I
暂无
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The bacterial phosphoenolpyruvate:sugar phosphotransferase system (PTS) includes a collection of proteins that accomplish phosphoryl transfer from phosphoenolpyruvate (PEP) to a sugar in the course of transport. The soluble proteins of the glucose transport pathway also function as regulators of diverse systems. The mechanism of interaction of the phosphoryl carrier proteins with each other as well as with their regulation targets has been amenable to study by nuclear magnetic resonance (NMR) spectroscopy. The three-dimensional solution structures of the complexes between the N-terminal domain of enzyme I and HPr and between HPr and enzyme IIA(Glc) have been elucidated. An analysis of the binding interfaces of HPr with enzyme I, IIA(Glc) and glycogen phosphorylase revealed that a common surface on HPr is involved in all these interactions. Similarly, a common surface on IIA(Glc) interacts with HPr, IIBGlc and glycerol kinase. Thus, there is a common motif for the protein-protein interactions characteristic of the PTS.
引用
收藏
页码:347 / 354
页数:8
相关论文
共 50 条
  • [1] Predicting protein-protein interactions in E-coli using machine learning methods
    Goyal, Kshama
    Vidyasagar, M.
    [J]. PROCEEDINGS OF THE 46TH IEEE CONFERENCE ON DECISION AND CONTROL, VOLS 1-14, 2007, : 2190 - 2195
  • [2] Two-hybrid system for characterization of protein-protein interactions in E-coli
    Hays, LB
    Chen, YSA
    Hu, JC
    [J]. BIOTECHNIQUES, 2000, 29 (02) : 288 - +
  • [3] The IDL of E-coli SSB links ssDNA and protein binding by mediating protein-protein interactions
    Bianco, Piero R.
    Pottinger, Sasheen
    Tan, Hui Yin
    Trong Nguyenduc
    Rex, Kervin
    Varshney, Umesh
    [J]. PROTEIN SCIENCE, 2017, 26 (02) : 227 - 241
  • [4] Chemical cross-linking and mass spectrometry to map three-dimensional protein structures and protein-protein interactions
    Sinz, Andrea
    [J]. MASS SPECTROMETRY REVIEWS, 2006, 25 (04) : 663 - 682
  • [5] Identifying three-dimensional structures of autophosphorylation complexes in crystals of protein kinases
    Xu, Qifang
    Malecka, Kimberly L.
    Fink, Lauren
    Jordan, E. Joseph
    Duffy, Erin
    Kolander, Samuel
    Peterson, Jeffrey R.
    Dunbrack, Roland L., Jr.
    [J]. SCIENCE SIGNALING, 2015, 8 (405)
  • [6] Identifying Three-dimensional Structures of Autophosphorylation Complexes in Crystals of Protein Kinases
    Dunbrack, Roland L., Jr.
    Xu, Qifang
    [J]. ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2017, 73 : A131 - A131
  • [7] SpatialPPI: Three-dimensional space protein-protein interaction prediction with AlphaFold Multimer
    Hu, Wenxing
    Ohue, Masahito
    [J]. COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2024, 23 : 1214 - 1225
  • [8] Three-dimensional structures of steroids and their protein targets
    Duax, WL
    Ghosh, D
    Pletnev, V
    Griffin, JF
    [J]. PURE AND APPLIED CHEMISTRY, 1996, 68 (06) : 1297 - 1302
  • [9] Which Three-Dimensional Characteristics Make Efficient Inhibitors of Protein-Protein Interactions?
    Kuenemann, Melaine A.
    Bourbon, Laura M. L.
    Labbe, Celine M.
    Villoutreix, Bruno O.
    Sperandio, Olivier
    [J]. JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2014, 54 (11) : 3067 - 3079
  • [10] Interpreting protein networks with three-dimensional structures
    Joan Teyra
    Philip M Kim
    [J]. Nature Methods, 2013, 10 : 43 - 44