YTHDF2 is a Potential Biomarker and Associated with Immune Infiltration in Kidney Renal Clear Cell Carcinoma

被引:24
|
作者
Su, Ganglin [1 ,2 ,3 ,4 ]
Liu, Tianshu [1 ]
Han, Xiaohong [1 ]
Sun, Hao [1 ,3 ,4 ]
Che, Wenan [5 ]
Hu, Kun [1 ,3 ,4 ]
Xiao, Junwen [1 ,3 ,4 ]
Li, Yanfeng [1 ,3 ,4 ]
Liu, Yuchen [1 ,3 ,4 ]
Li, Wujiao [3 ,4 ]
Mei, Hongbing [1 ,3 ,4 ]
机构
[1] Shenzhen Univ, Shenzhen Peoples Hosp 2, Dept Urol, Affiliated Hosp 1, Shenzhen, Peoples R China
[2] Shantou Univ, Med Coll, Shantou, Peoples R China
[3] Shenzhen Univ, Shenzhen Peoples Hosp 2, Key Lab Med Reprogramming Technol, Affiliated Hosp 1, Shenzhen, Peoples R China
[4] Shenzhen Univ, Shenzhen Peoples Hosp 2, Guangdong Key Lab Syst Biol & Synthet Biol Urogen, Affiliated Hosp 1, Shenzhen, Peoples R China
[5] Hunan Univ Sci & Technol, Sch Life Sci, Hunan Key Lab Econ Crops Genet Improvement & Inte, Xiangtan, Peoples R China
基金
中国国家自然科学基金; 美国国家科学基金会;
关键词
YTHDF2; KIRC; biomarker; prognosis; immune infiltrates; N6-methyladenosine (m6A) RNA methylation; M(6)A READER YTHDF2; CANCER; EXPRESSION; RESISTANCE; PLATFORM; SERVER;
D O I
10.3389/fphar.2021.709548
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Clear cell renal cell carcinoma (ccRCC or KIRC) has a high mortality rate globally. It is necessary to identify biomarkers and investigate the mechanisms those biomarkers are associated with, to improve the prognosis of patients with KIRC. N6-Methyladenosine (m6A) affects the fate of modified RNA molecules and is involved in tumor progression. Different webservers were used in our research to investigate the mRNA transcription and clinical significance of YTHDF2 in KIRC. Survival analysis revealed that patients with elevated YTHDF2 transcription had a slightly longer OS and DFS than those with low YTHDF2 expression. YTHDF2 expression was shown to be significantly associated with the abundance of immune cells such as B cells, CD8(+) T cells, CD4(+) T cells, macrophages, neutrophils, and dendritic cells. For a series of enrichment studies, we combined information on YTHDF2-binding molecules and expression-linked genes and identified the possible influence of "mRNA surveillance pathway," "RNA degradation," and "RNA transport" in the biology or pathogeny of KIRC. In addition, we identified multiple miRNA, kinase, and transcription factor targets of YTHDF2 in KIRC and constructed target networks. Overall, our findings show that YTHDF2 is a possible indicator of immune infiltration in the KIRC.</p>
引用
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页数:11
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