Comparison of Automated Ribotyping, spa Typing, and MLST in 108 Clinical Isolates of Staphylococcus aureus from Orthopedic Infections

被引:4
|
作者
Ravaioli, Stefano [1 ]
Campoccia, Davide [1 ]
Ruppitsch, Werner [2 ]
Allerberger, Franz [2 ]
Poggi, Alessandro [3 ]
Chisari, Emanuele [4 ]
Montanaro, Lucio [1 ,5 ]
Arciola, Carla Renata [1 ,5 ,6 ]
机构
[1] IRCCS Ist Ortped Rizzoli, Lab Patol Infezioni Assoc Impianto, Via Barbiano 1-10, I-40136 Bologna, Italy
[2] Austrian Agcy Hlth & Food Safety, Div Human Med, A-1010 Vienna, Austria
[3] Univ Modena & Reggio Emilia, Dept Biomed Metab & Neural Sci, Sect Publ Hlth, I-41125 Modena, Italy
[4] Thomas Jefferson Univ, Rothman Orthpaed Inst, Philadelphia, PA 19107 USA
[5] Univ Bologna, Dept Expt Diagnost & Specialty Med, via San Giacomo 14, I-40126 Bologna, Italy
[6] IRCCS Ist Ortped Rizzoli, Lab Immunoreumatol & Rigeneraz Tissutale, via Barbiano 1, Via Barbiano 1-10, I-40136 Bologna, Italy
关键词
Staphylococcus aureus; orthopedic infections; strain typing; Riboprinting; multilocus sequence typing (MLST); spa typing; METHICILLIN-RESISTANT; GLOBAL EPIDEMIOLOGY; FECAL CONTAMINATION; LEUKOCIDAL TOXINS; ESCHERICHIA-COLI; PATTERNS; POPULATION; PREVALENCE; EVOLUTION; RRNDB;
D O I
10.3390/ijms23031660
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
108 isolates of Staphylococcus aureus, belonging to six large ribogroups according to the automated Ribo-Printer(R) system, were studied with two highly used molecular methods for epidemiological studies, namely multi-locus sequence typing (MLST) and spa typing, followed by BURP and eBURST v3 analysis for clustering spa types and sequence (ST) types. The aim was to evaluate whether automated ribotyping could be considered a useful screening tool for identifying S. aureus genetic lineages with respect to spa typing and MLST. Clarifying the relationship of riboprinting with these typing methods and establishing whether ribogroups fit single clonal complexes were two main objectives. Further information on the genetic profile of the isolates was obtained from agr typing and the search for the mecA, tst genes, and the IS256 insertion sequence. Automated ribotyping has been shown to predict spa clonal complexes and MLST clonal complexes. The high cost and lower discriminatory power of automated ribotyping compared to spa and MSLT typing could be an obstacle to fine genotyping analyzes, especially when high discriminatory power is required. On the other hand, numerous advantages such as automation, ease and speed of execution, stability, typeability and reproducibility make ribotyping a reliable method to be juxtaposed to gold standard methods.
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页数:16
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