NMR investigation of Tyr105 mutants in TEM-1 β-lactamase -: Dynamics are correlated with function

被引:29
|
作者
Doucet, Nicolas
Savard, Pierre-Yves
Pelletier, Joelle N.
Gagne, Stephane M.
机构
[1] Univ Montreal, Dept Chim, Montreal, PQ H3C 3J7, Canada
[2] Univ Laval, Dept Biochim & Microbiol & CREFSIP, Quebec City, PQ G1K 7P4, Canada
[3] Univ Montreal, Dept Biochim, Montreal, PQ H3C 3J7, Canada
关键词
D O I
10.1074/jbc.M609777200
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The existence of coupled residue motions on various time scales in enzymes is now well accepted, and their detailed characterization has become an essential element in understanding the role of dynamics in catalysis. To this day, a handful of enzyme systems has been shown to rely on essential residue motions for catalysis, but the generality of such phenomena remains to be elucidated. Using NMR spectroscopy, we investigated the electronic and dynamic effects of several mutations at position 105 in TEM-1 beta-lactamase, an enzyme responsible for antibiotic resistance. Even in absence of substrate, our results show that the number and magnitude of short and long range effects on H-1-N-15 chemical shifts are correlated with the catalytic efficiencies of the various Y105X mutants investigated. In addition, N-15 relaxation experiments on mutant Y105D show that several active-site residues of TEM-1 display significantly altered motions on both picosecond-nanosecond and microsecond-millisecond time scales despite many being far away from the site of mutation. The altered motions among various active-site residues in mutant Y105D may account for the observed decrease in catalytic efficiency, therefore suggesting that short and long range residue motions could play an important catalytic role in TEM-1 beta-lactamase. These results support previous observations suggesting that internal motions play a role in promoting protein function.
引用
收藏
页码:21448 / 21459
页数:12
相关论文
共 28 条
  • [1] Evolvability as a Function of Purifying Selection in TEM-1 β-Lactamase
    Stiffler, Michael A.
    Hekstra, Doeke R.
    Ranganathan, Rama
    [J]. CELL, 2015, 160 (05) : 882 - 892
  • [2] MUTANTS OF THE TEM-1 BETA-LACTAMASE CONFERRING RESISTANCE TO CEFTAZIDIME
    PAYNE, DJ
    MARRIOTT, MS
    AMYES, SGB
    [J]. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 1989, 24 (02) : 103 - 110
  • [3] Site-saturation mutagenesis of Tyr-105 reveals its importance in substrate stabilization and discrimination in TEM-1 β-lactamase
    Doucet, N
    De Wals, PY
    Pelletier, JN
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (44) : 46295 - 46303
  • [4] Molecular dynamics simulations of the TEM-1,β-lactamase complexed with cephalothin
    Díaz, N
    Suárez, D
    Merz, KM
    Sordo, TL
    [J]. JOURNAL OF MEDICINAL CHEMISTRY, 2005, 48 (03) : 780 - 791
  • [5] INVESTIGATION OF THE FOLDING PATHWAY OF THE TEM-1 BETA-LACTAMASE
    VANHOVE, M
    RAQUET, X
    FRERE, JM
    [J]. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 1995, 22 (02) : 110 - 118
  • [6] Dynamical Aspects of TEM-1 β-Lactamase Probed by Molecular Dynamics
    Danilo Roccatano
    Gianluca Sbardella
    Massimiliano Aschi
    Gianfranco Amicosante
    Cecilia Bossa
    Alfredo Di Nola
    Fernando Mazza
    [J]. Journal of Computer-Aided Molecular Design, 2005, 19 : 329 - 340
  • [7] Dynamical aspects of TEM-1 β-lactamase probed by molecular dynamics
    Roccatano, D
    Sbardella, G
    Aschi, M
    Amicosante, G
    Bossa, C
    Di Nola, A
    Mazza, F
    [J]. JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 2005, 19 (05) : 329 - 340
  • [8] The structure of Toho1 β-lactamase in complex with penicillin reveals the role of Tyr105 in substrate recognition
    Langan, Patricia S.
    Vandavasi, Venu Gopal
    Weiss, Kevin L.
    Cooper, Jonathan B.
    Ginell, Stephan L.
    Coates, Leighton
    [J]. FEBS OPEN BIO, 2016, 6 (12): : 1170 - 1177
  • [9] The Role of Rigid Residues in Modulating TEM-1 β-Lactamase Function and Thermostability
    Kolbaba-Kartchner, Bethany
    Kazan, I. Can
    Mills, Jeremy H.
    Ozkan, S. Banu
    [J]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2021, 22 (06) : 1 - 19
  • [10] Active TEM-1 β-lactamase mutants with random peptides inserted in three surface loops
    Mathonet, P
    Deherve, J
    Soumillion, P
    Fastrez, J
    [J]. FEBS JOURNAL, 2005, 272 : 85 - 85