The complete mitochondrial genome of Lasiopodomys brandtii

被引:2
|
作者
Tian, Xiangyu [1 ]
Gu, Shiming [1 ]
Pan, Dan [1 ]
Shi, Luye [1 ]
Wang, Zhenlong [1 ]
机构
[1] Zhengzhou Univ, Sch Life Sci, Zhengzhou, Henan, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 01期
基金
中国国家自然科学基金;
关键词
Complete mitochondrial genome; Lasiopodomys brandtii; phylogenetic tree; RODENTIA;
D O I
10.1080/23802359.2019.1703567
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
In this study, the complete mitochondrial (mt) genome sequence of Lasiopodomys brandtii was determined using Illumina NovaSeq platform. The assembled genome was 16,557 bp in length and included 13 protein-coding genes, 2 ribosomal RNA genes, and 22 transfer RNA genes. The total nucleotide composition frequencies present clearly the A-T skew (59.5%), which mostly in D-loop and PCGs regions. Whole mt genome phylogenetic analysis revealed a closely related among Lasiopodomys, Proedromys, and Microtus with high support. It would provide further evolutionary research for the subfamily Arvicolinae.
引用
收藏
页码:364 / 365
页数:2
相关论文
共 50 条
  • [1] Complete mitochondrial genome of Lasiopodomys mandarinus mandarinus (Arvicolinae, Rodentia)
    Li, Yangwei
    Lu, Jiqi
    Wang, Zhenlong
    MITOCHONDRIAL DNA PART A, 2016, 27 (02) : 1459 - 1460
  • [2] Complete mitochondrial genome of the mandarin vole Lasiopodomys mandarinus (Rodentia: Cricetidae)
    Cong, Haiyan
    Kong, Lingming
    Liu, Zexin
    Wu, Yi
    Motokawa, Masaharu
    Harada, Masashi
    Li, Yuchun
    MITOCHONDRIAL DNA PART A, 2016, 27 (01) : 760 - 761
  • [3] Sequence and phylogenetic analysis of the complete mitochondrial genome of Lasiopodomys mandarinus mandarinus (Arvicolinae, Rodentia)
    Li, Yangwei
    Shi, Yuhua
    Lu, Jiqi
    Ji, Weihong
    Wang, Zhenlong
    GENE, 2016, 593 (02) : 302 - 307
  • [4] The complete mitochondrial genome of insect-eating brandt's bat, Myotis brandtii (Myotis, Vespertilionidae)
    Jiang, Jian-Jun
    Wang, Shu-Qi
    Li, Yan-Jiao
    Zhang, Wei
    Yin, An-Guo
    Hu, Min
    MITOCHONDRIAL DNA PART A, 2016, 27 (02) : 1403 - 1404
  • [5] A complete mitochondrial genome of the Damaraland mole rat Fukomys damarensis retrieved from the published genome of the brandt's bat Myotis brandtii
    Shi, Huizhen
    Ren, Min
    Zhang, Shuyi
    Mao, Xiuguang
    MITOCHONDRIAL DNA PART A, 2016, 27 (06) : 4282 - 4283
  • [6] The remarkable hypoxia tolerance in Brandt's voles (Lasiopodomys brandtii)
    Li, Wei
    Dong, Yanan
    Dong, Qianqian
    Sun, Hong
    Zhang, Yifeng
    Wang, Zhenlong
    EUROPEAN JOURNAL OF NEUROSCIENCE, 2021, 53 (05) : 1652 - 1660
  • [7] Differential responses of Lasiopodomys mandarinus and Lasiopodomys brandtii to chronic hypoxia: a cross-species brain transcriptome analysis
    Qianqian Dong
    Luye Shi
    Yangwei Li
    Mengwan Jiang
    Hong Sun
    Baishi Wang
    Han Cheng
    Yifeng Zhang
    Tian Shao
    Yuhua Shi
    Zhenlong Wang
    BMC Genomics, 19
  • [8] Antioxidant response to severe hypoxia in Brandt's vole Lasiopodomys brandtii
    Shi, Luye
    Chen, Bojian
    Wang, Xinrui
    Huang, Maolin
    Qiao, Congcong
    Wang, Jingou
    Wang, Zhenlong
    INTEGRATIVE ZOOLOGY, 2022, 17 (04): : 581 - 595
  • [9] Differential responses of Lasiopodomys mandarinus and Lasiopodomys brandtii to chronic hypoxia: a cross-species brain transcriptome analysis
    Dong, Qianqian
    Shi, Luye
    Li, Yangwei
    Jiang, Mengwan
    Sun, Hong
    Wang, Baishi
    Cheng, Han
    Zhang, Yifeng
    Shao, Tian
    Shi, Yuhua
    Wang, Zhenlong
    BMC GENOMICS, 2018, 19
  • [10] Multiple infections of zoonotic pathogens in wild Brandt's voles (Lasiopodomys brandtii)
    Guo, Yongman
    Li, Zhengrun
    Dong, Shike
    Si, Xiaoyan
    Ta, Na
    Liang, Hanwei
    Xu, Lei
    VETERINARY MEDICINE AND SCIENCE, 2023, 9 (05) : 2201 - 2211