Dataset for dose and time-dependent transcriptional response to ionizing radiation exposure

被引:4
|
作者
Rouchka, Eric C. [1 ,2 ]
Flight, Robert M. [3 ]
Fasciotto, Bridgitte H. [4 ,5 ,6 ]
Estrada, Rosendo [7 ]
Eaton, John W. [8 ,9 ,10 ]
Patibandla, Phani K. [11 ,12 ]
Waigel, Sabine J. [10 ]
Li, Dazhuo [1 ]
Kirtley, John K. [1 ]
Sethu, Palaniappan [11 ,12 ]
Keynton, Robert S. [7 ]
机构
[1] Univ Louisville, Dept Comp Engn & Comp Sci, Louisville, KY 40292 USA
[2] Univ Louisville, Kentucky Biomed Res Infrastruct Network Bioinform, Louisville, KY 40292 USA
[3] Univ Kentucky, Dept Mol & Cellular Biochem, Lexington, KY 40356 USA
[4] Univ Louisville, Dept Elect & Comp Engn, Louisville, KY 40292 USA
[5] Univ Louisville, ElectroOpt Res Inst, Louisville, KY 40292 USA
[6] Univ Louisville, Nanotechnol Ctr, Louisville, KY 40292 USA
[7] Univ Louisville, Dept Bioengn, Louisville, KY 40292 USA
[8] Univ Louisville, Dept Med, Louisville, KY 40292 USA
[9] Univ Louisville, Dept Pharmacol & Toxicol, Louisville, KY 40292 USA
[10] Univ Louisville, James Graham Brown Canc Ctr, Louisville, KY 40202 USA
[11] Univ Alabama Birmingham, Dept Med, Div Cardiovasc Dis, Birmingham, AL 35294 USA
[12] Univ Alabama Birmingham, Dept Biomed Engn, Birmingham, AL 35294 USA
来源
DATA IN BRIEF | 2019年 / 27卷
基金
美国国家航空航天局; 美国国家卫生研究院;
关键词
Radiation exposure; Microarrays; Space flight; Gene expression; Lab-on-a-chip;
D O I
10.1016/j.dib.2019.104624
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Exposure to ionizing radiation associated with highly energetic and charged heavy particles is an inherent risk astronauts face in long duration space missions. We have previously considered the transcriptional effects that three levels of radiation (0.3 Gy, 1.5 Gy, and 3.0 Gy) have at an immediate time point (1 hr) post-exposure [1]. Our analysis of these results suggest effects on transcript levels that could be modulated at lower radiation doses [2]. In addition, a time dependent effect is likely to be present. Therefore, in order to develop a lab-on-a-chip approach for detection of radiation exposure in terms of both radiation level and time since exposure, we developed a time- and dose-course study to determine appropriate sensitive and specific transcript biomarkers that are detectable in blood samples. The data described herein was developed from a study measuring exposure to 0.15 Gy, 0.30 Gy, and 1.5 Gy of radiation at 1 hr, 2 hr, and 6 hr post-exposure using Affymetrix (R) GeneChip (R) PrimeView (TM) microarrays. This report includes raw gene expression data files from the resulting microarray experiments representing typical radiation exposure levels an astronaut may experience as part of a long duration space mission. The data described here is available in NCBI's Gene Expression Omnibus (GEO), accession GSE63952. (c) 2019 The Authors. Published by Elsevier Inc. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
引用
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页数:8
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