Construction of a ceRNA coregulatory network and screening of hub biomarkers for salt-sensitive hypertension

被引:12
|
作者
Zhang, Ling [1 ]
Qi, Han [2 ,3 ]
Liu, Zheng [4 ]
Peng, Wen-Juan [1 ]
Cao, Han [1 ]
Guo, Chun-Yue [1 ]
Sun, Yan-Yan [1 ]
Pao, Christine [5 ]
Xiang, Yu-Tao [6 ]
机构
[1] Capital Med Univ, Beijing Municipal Key Lab Clin Epidemiol, Sch Publ Hlth, Dept Epidemiol & Hlth Stat, Beijing, Peoples R China
[2] Capital Med Univ, Beijing Anding Hosp, Sch Mental Hlth, Natl Clin Res Ctr Mental Disorders,Beijing Key La, Beijing, Peoples R China
[3] Capital Med Univ, Beijing Anding Hosp, Sch Mental Hlth, Adv Innovat Ctr Human Brain Protect, Beijing, Peoples R China
[4] Peking Univ, Sci Dept, Peoples Hosp, Beijing, Peoples R China
[5] Univ North Carolina Chapel Hill, Dept Psychiat, Chapel Hill, NC USA
[6] Univ Macau, Inst Translat Med, Fac Hlth Sci, Unit Psychiat, Macau, Peoples R China
基金
北京市自然科学基金; 中国国家自然科学基金;
关键词
biomarkers; competing endogenous RNA; long non-coding RNA; networks; salt-sensitive hypertension; COMPETING ENDOGENOUS RNA; BLOOD-PRESSURE; NONCODING RNA; SODIUM SENSITIVITY; MESSENGER-RNA; EXPRESSION; SUSCEPTIBILITY; HERITABILITY; POLYMORPHISM; VARIABILITY;
D O I
10.1111/jcmm.15285
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Salt-sensitive hypertension (SSH) is an independent risk factor for cardiovascular disease. The regulation of long non-coding RNAs, mRNAs and competing endogenous RNAs (ceRNAs) in the pathogenesis of SSH is uncertain. An RNA microarray was performed to discover SSH-associated differentially expressed lncRNAs (DElncRNAs) and mRNAs (DEmRNAs), and 296 DElncRNAs and 44 DEmRNAs were identified, and 247 DElncRNAs and 44 DEmRNAs among these RNAs were included in the coexpression network. The coregulatory network included 23 ceRNA loops, and six hub RNAs (lnc-ILK-8:1, lnc-OTX1-7:1, lnc-RCAN1-6:1, GIMAP8, SUV420H1 and PIGV) were identified for further population validation. The ceRNA correlations among lnc-OTX1-7:1, hsa-miR-361-5p and GIMAP8 were confirmed in SSH and SRH patients. A larger-sample validation confirmed that GIMAP8, SUV420H1 and PIGV were differentially expressed between the SSH and SRH groups. In addition, SUV420H1 was included in the SSH screening model, and the area under the curve of the model was 0.720 (95% CI: 0.624-0.816). Our study explored the transcriptome profiles of SSH and constructed a ceRNA network to help elucidate the mechanism of SSH. In addition, SUV420H1 was identified as a hub element that participates in SSH transcriptional regulation and as a potential biomarker for the early diagnosis of SSH.
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页码:7254 / 7265
页数:12
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