ImmtorLig_DB: repertoire of virtually screened small molecules against immune receptors to bolster host immunity

被引:2
|
作者
Chatterjee, Deepyan [1 ]
Kaur, Gurkirat [1 ]
Muradia, Shilpa [1 ]
Singh, Balvinder [1 ]
Agrewala, Javed N. [2 ]
机构
[1] CSIR Inst Microbial Technol, Chandigarh 160036, India
[2] Indian Inst Technol Ropar, Rupnagar 140001, India
关键词
PROTEIN-PROTEIN INTERACTIONS; DRUG-TARGET INTERACTIONS; DISCOVERY; ANTAGONISTS; LIGANDS; DESIGN; BIOSIMILARS; STRATEGIES; INHIBITORS; DATABASES;
D O I
10.1038/s41598-018-36179-5
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Host directed therapies to boost immunity against infection are gaining considerable impetus following the observation that use of antibiotics has become a continuous source for the emergence of drug resistant strains of pathogens. Receptors expressed by the cells of immune system play a cardinal role in initiating sequence of events necessary to ameliorate many morbid conditions. Although, ligands for the immune receptors are available; but their use is limited due to complex structure, synthesis and cost-effectiveness. Virtual screening (VS) is an integral part of chemoinformatics and computer-aided drug design (CADD) and aims to streamline the process of drug discovery. ImmtorLig_DB is a repertoire of 5000 novel small molecules, screened from ZINC database and ranked using structure based virtual screening (SBVS) against 25 immune receptors which play a pivotal role in defending and initiating the activation of immune system. Consequently, in the current study, small molecules were screened by docking on the essential domains present on the receptors expressed by cells of immune system. The screened molecules exhibited efficacious binding to immune receptors, and indicated a possibility of discovering novel small molecules. Other features of ImmtorLig_DB include information about availability, clustering analysis, and estimation of absorption, distribution, metabolism, and excretion (ADME) properties of the screened small molecules. Structural comparisons indicate that predicted small molecules may be considered novel. Further, this repertoire is available via a searchable graphical user interface (GUI) through http://bioinfo.imtech.res.in/bvs/immtor/.
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页数:13
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  • [1] ImmtorLig_DB: repertoire of virtually screened small molecules against immune receptors to bolster host immunity
    Deepyan Chatterjee
    Gurkirat Kaur
    Shilpa Muradia
    Balvinder Singh
    Javed N. Agrewala
    [J]. Scientific Reports, 9