WHOLE SLIDE IMAGE CLASSIFICATION VIA ITERATIVE PATCH LABELLING

被引:0
|
作者
Zhang, Chaoyi [1 ]
Song, Yang [1 ]
Zhang, Donghao [1 ]
Liu, Sidong [2 ]
Chen, Mei [3 ,4 ]
Cai, Weidong [1 ]
机构
[1] Univ Sydney, Sch Informat Technol, Sydney, NSW, Australia
[2] Univ Sydney, Sydney Med Sch, Brain & Mind Ctr, Sydney, NSW, Australia
[3] SUNY Albany, Elect & Comp Engn, Albany, NY 12222 USA
[4] Carnegie Mellon Univ, Robot Inst, Pittsburgh, PA 15213 USA
关键词
Iterative patch labelling; brain cancer; WSI; discriminative patches; classification; MORPHOLOGIC FEATURES;
D O I
暂无
中图分类号
TP31 [计算机软件];
学科分类号
081202 ; 0835 ;
摘要
Brain tumor can be a fatal disease in the world. With the aim of improving survival rates, many computerized algorithms have been proposed to assist the pathologists to make a diagnosis, using Whole Slide Pathology Images (WSI). Most methods focus on performing patch-level classification and aggregating the patch-level results to obtain the image classification. Since not all patches carry diagnostic information, it is thus important for our algorithm to recognize discriminative and non-discriminative patches. In this study, we propose an iterative patch labelling algorithm based on the Convolutional Neural Network (CNN), with a well-designed thresholding scheme, a training policy and a novel discriminative model architecture, to distinguish patches and use the discriminative ones to achieve WSI-classification. Our method is evaluated on the MICCAI 2015 Challenge Dataset, and shows a large improvement over the baseline approaches.
引用
收藏
页码:1408 / 1412
页数:5
相关论文
共 50 条
  • [1] Iterative multiple instance learning for weakly annotated whole slide image classification
    Zhou, Yuanpin
    Che, Shuanlong
    Lu, Fang
    Liu, Si
    Yan, Ziye
    Wei, Jun
    Li, Yinghua
    Ding, Xiangdong
    Lu, Yao
    PHYSICS IN MEDICINE AND BIOLOGY, 2023, 68 (15):
  • [2] Patch-based Convolutional Neural Network for Whole Slide Tissue Image Classification
    Hou, Le
    Samaras, Dimitris
    Kurc, Tahsin M.
    Gao, Yi
    Davis, James E.
    Saltz, Joel H.
    2016 IEEE CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION (CVPR), 2016, : 2424 - 2433
  • [3] A Graph-Transformer for Whole Slide Image Classification
    Zheng, Yi
    Gindra, Rushin H.
    Green, Emily J.
    Burks, Eric J.
    Betke, Margrit
    Beane, Jennifer E.
    Kolachalama, Vijaya B.
    IEEE Transactions on Medical Imaging, 2022, 41 (11) : 3003 - 3015
  • [4] A graph-transformer for whole slide image classification
    Zheng, Yi
    Gindra, Rushin H.
    Green, Emily J.
    Burks, Eric J.
    Betke, Margrit
    Beane, Jennifer E.
    Kolachalama, Vijaya B.
    arXiv, 2022,
  • [5] DEEP FISHER VECTOR CODING FOR WHOLE SLIDE IMAGE CLASSIFICATION
    Akbarnejad, Amir
    Ray, Nilanjan
    Bigras, Gilbert
    2021 IEEE 18TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING (ISBI), 2021, : 243 - 246
  • [6] Hybrid Supervision Learning for Pathology Whole Slide Image Classification
    Li, Jiahui
    Chen, Wen
    Huang, Xiaodi
    Yang, Shuang
    Hu, Zhiqiang
    Duan, Qi
    Metaxas, Dimitris N.
    Li, Hongsheng
    Zhang, Shaoting
    MEDICAL IMAGE COMPUTING AND COMPUTER ASSISTED INTERVENTION - MICCAI 2021, PT VIII, 2021, 12908 : 309 - 318
  • [7] Bayesian Collaborative Learning for Whole-Slide Image Classification
    Yu, Jin-Gang
    Wu, Zihao
    Ming, Yu
    Deng, Shule
    Wu, Qihang
    Xiong, Zhongtang
    Yu, Tianyou
    Xia, Gui-Song
    Jiang, Qingping
    Li, Yuanqing
    IEEE TRANSACTIONS ON MEDICAL IMAGING, 2023, 42 (06) : 1809 - 1821
  • [8] On the Benefits of Region of Interest Detection for Whole Slide Image Classification
    Korkut, Sena
    Erkan, Cihan
    Aksoy, Selim
    MEDICAL IMAGING 2023, 2023, 12471
  • [9] Patch-Based Nonlinear Image Registration for Gigapixel Whole Slide Images
    Lotz, J.
    Olesch, J.
    Mueller, B.
    Polzin, T.
    Galuschka, P.
    Lotz, J. M.
    Heldmann, S.
    Laue, H.
    Gonzalez-Vallinas, M.
    Warth, A.
    Lahrmann, B.
    Grabe, N.
    Sedlaczek, O.
    Breuhahn, K.
    Modersitzki, J.
    IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2016, 63 (09) : 1812 - 1819
  • [10] Patch-to-Sample Reasoning for Cervical Cancer Screening of Whole Slide Image
    Cao M.
    Fei M.
    Xiong H.
    Zhang X.
    Fan X.
    Zhang L.
    Wang Q.
    IEEE Transactions on Artificial Intelligence, 2024, 5 (06): : 2779 - 2789