Next-generation transcriptome characterization in three Nacella species (Patellogastropoda: Nacellidae) from South America and Antarctica

被引:3
|
作者
Fuenzalida, Gonzalo [1 ,4 ]
Poulin, Elie [2 ]
Gonzalez-Wevar, Claudio [2 ]
Molina, Cristian [5 ]
Cardenas, Leyla [3 ]
机构
[1] Univ Paris 06, UMR 7144, Equipe ABICE, Stn Biol Roscoff, F-29680 Roscoff, France
[2] Univ Chile, Fac Ciencias, Dept Ciencias Ecol, Lab Ecol Mol,IEB, Santiago, Chile
[3] Univ Austral Chile, Inst Ciencias Ambient & Evolut, Fac Ciencias, Valdivia, Chile
[4] CNRS, UMR Adaptat & Divers Milieu Marin 7144, Stn Biol Roscoff, F-29680 Roscoff, France
[5] Univ Austral Chile, Fac Ciencias, AUSTRAL Omics, Valdivia, Chile
关键词
Pyrosequencing; Comparative transcriptome; Patellogastropods; Antarctica; South America; BIOGEOGRAPHY;
D O I
10.1016/j.margen.2014.06.004
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The southern tip of South America and Antarctica are particularly interesting due to many genera and also species currently sharing between both areas. The genus Nacella (Patellogastropoda: Nacellidae) is distributed in different regions of South America and Antarctica living preferentially on rocks and boulders and grazing on algae, diatoms and bacterial films. We described the transcriptomes of three Nacella species, Nacella concinna (Strebel, 1908), inhabiting the Antarctic Peninsula; Nacella magallanica (Gmelin, 1791), from Patagonia and Nacella clypeater (Lesson, 1831), from central Chile. In total, we obtained over 20,000 contigs with an average length of 583 bp. Homologous protein coding genes (PCGs) for mitochondrial genome of the three species were characterized and a database of molecular markers was also generated. This study represents the first publicly available report on pyrosequencing data for patellogastropod species, and provides an important comparative resource for studies in ecophysiology and evolutionary adaptation in marine invertebrate species. (c) 2014 Elsevier B.V. All rights reserved.
引用
收藏
页码:89 / 91
页数:3
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