Enzymological paradigms have shifted recently to acknowledge the biological importance of catalytic promiscuity. However, catalytic promiscuity is a poorly understood property, and no thermodynamic treatment has described the conformational landscape of promiscuous versus substrate-specific enzymes. Here, two structurally similar glutathione transferase (GST, glutathione S-transferase) isoforms with high specificity or high promiscuity are compared. Differential scanning calorimetry (DSC) indicates a reversible low temperature transition for the promiscuous GSTA1-1 that is not observed with substrate-specific GSTA4-4. This transition is assigned to rearrangement of the C terminus at the active site of GSTA1-1 based on the effects of ligands and mutations. Near-UV and far-UV circular dichroism indicate that this transition is due to repacking of tertiary contacts with the remainder of the subunit, rather than "unfolding" of the C terminus per se. Analysis of the DSC data using a modified Landau theory indicates that the local conformational landscape of the active site of GSTA1-1 is smooth, with barrier-less transitions between states. The partition function of the C-terminal states is a broad unimodal distribution at all temperatures within this DSC transition. In contrast, the remainder of the GSTA1-1 subunit and the GSTA4-4 protein exhibit folded and unfolded macrostates with a significant energy barrier separating them. Their partition function includes a sharp unimodal distribution of states only at temperatures that yield either folded or unfolded macrostates. At intermediate temperatures the partition function includes a bimodal distribution. The barrierless rearrangement of the GSTA1-1 active site within a local smooth energy landscape suggests a thermodynamic basis for catalytic promiscuity.
机构:
Chung Ang Univ, Biomol Chem Lab, Dept Chem, Coll Nat Sci, Seoul 156756, South KoreaChung Ang Univ, Biomol Chem Lab, Dept Chem, Coll Nat Sci, Seoul 156756, South Korea
Lee, Jin-Joo
Kong, Ji-Na
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Chung Ang Univ, Biomol Chem Lab, Dept Chem, Coll Nat Sci, Seoul 156756, South KoreaChung Ang Univ, Biomol Chem Lab, Dept Chem, Coll Nat Sci, Seoul 156756, South Korea
Kong, Ji-Na
Jo, Dong-Hyeon
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Chung Ang Univ, Biomol Chem Lab, Dept Chem, Coll Nat Sci, Seoul 156756, South KoreaChung Ang Univ, Biomol Chem Lab, Dept Chem, Coll Nat Sci, Seoul 156756, South Korea
机构:
Shandong Univ, State Key Lab Microbial Technol, Jinan 250100, Peoples R ChinaShandong Univ, State Key Lab Microbial Technol, Jinan 250100, Peoples R China
Tian, Li
Liu, Shijia
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Shandong Univ, Taishan Coll, Jinan 250100, Peoples R ChinaShandong Univ, State Key Lab Microbial Technol, Jinan 250100, Peoples R China
Liu, Shijia
Wang, Shuai
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Shandong Univ, State Key Lab Microbial Technol, Jinan 250100, Peoples R ChinaShandong Univ, State Key Lab Microbial Technol, Jinan 250100, Peoples R China
Wang, Shuai
Wang, Lushan
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Shandong Univ, State Key Lab Microbial Technol, Jinan 250100, Peoples R ChinaShandong Univ, State Key Lab Microbial Technol, Jinan 250100, Peoples R China
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Merck & Co Inc, Discovery Biol, South San Francisco, CA 94080 USA
CALTECH, Div Biol & Bioengn, Pasadena, CA 91125 USAMerck & Co Inc, Discovery Biol, South San Francisco, CA 94080 USA
Johnston, Kadina E.
Almhjell, Patrick J.
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Stanford Univ, Dept Biochem, Stanford, CA 94305 USA
CALTECH, Div Chem & Chem Engn, Pasadena, CA 91125 USAMerck & Co Inc, Discovery Biol, South San Francisco, CA 94080 USA
Almhjell, Patrick J.
Watkins-Dulaney, Ella J.
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CALTECH, Div Biol & Bioengn, Pasadena, CA 91125 USAMerck & Co Inc, Discovery Biol, South San Francisco, CA 94080 USA
Watkins-Dulaney, Ella J.
Liu, Grace
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Harvard Med Sch, Dept Biomed Informat, Boston, MA 02115 USA
CALTECH, Div Biol & Bioengn, Pasadena, CA 91125 USAMerck & Co Inc, Discovery Biol, South San Francisco, CA 94080 USA
Liu, Grace
Porter, Nicholas J.
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Codexis Inc, Prot Engn, Redwood City, CA 94063 USA
CALTECH, Div Chem & Chem Engn, Pasadena, CA 91125 USAMerck & Co Inc, Discovery Biol, South San Francisco, CA 94080 USA
Porter, Nicholas J.
Yang, Jason
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CALTECH, Div Chem & Chem Engn, Pasadena, CA 91125 USAMerck & Co Inc, Discovery Biol, South San Francisco, CA 94080 USA
Yang, Jason
Arnold, Frances H.
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CALTECH, Div Biol & Bioengn, Pasadena, CA 91125 USA
CALTECH, Div Chem & Chem Engn, Pasadena, CA 91125 USAMerck & Co Inc, Discovery Biol, South San Francisco, CA 94080 USA
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Stanford Univ, Dept Biochem, Stanford, CA 94305 USAStanford Univ, Dept Biochem, Stanford, CA 94305 USA
Yabukarski, Filip
Biel, Justin T.
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Univ Calif San Francisco, Dept Bioengn & Therapeut Sci, San Francisco, CA 94143 USAStanford Univ, Dept Biochem, Stanford, CA 94305 USA
Biel, Justin T.
Pinney, Margaux M.
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Stanford Univ, Dept Biochem, Stanford, CA 94305 USAStanford Univ, Dept Biochem, Stanford, CA 94305 USA
Pinney, Margaux M.
Doukov, Tzanko
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SLAC Natl Accelerator Lab, Stanford Synchrotron Radiat Lightsource, Menlo Pk, CA 94025 USAStanford Univ, Dept Biochem, Stanford, CA 94305 USA
Doukov, Tzanko
Powers, Alexander S.
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Stanford Univ, Dept Chem, Stanford, CA 94305 USA
Stanford Univ, Dept Comp Sci, Stanford, CA 94305 USA
Stanford Univ, Stanford ChEM H, Stanford, CA 94305 USAStanford Univ, Dept Biochem, Stanford, CA 94305 USA
Powers, Alexander S.
Fraser, James S.
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Univ Calif San Francisco, Dept Bioengn & Therapeut Sci, San Francisco, CA 94143 USAStanford Univ, Dept Biochem, Stanford, CA 94305 USA
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Australian Natl Univ, Res Sch Chem, GPO Box 4, Canberra, ACT 0200, AustraliaAustralian Natl Univ, Res Sch Chem, GPO Box 4, Canberra, ACT 0200, Australia
Correy, Galen J.
Carr, Paul D.
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Australian Natl Univ, Res Sch Chem, GPO Box 4, Canberra, ACT 0200, AustraliaAustralian Natl Univ, Res Sch Chem, GPO Box 4, Canberra, ACT 0200, Australia
Carr, Paul D.
Meirelles, Tamara
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Australian Natl Univ, Res Sch Chem, GPO Box 4, Canberra, ACT 0200, AustraliaAustralian Natl Univ, Res Sch Chem, GPO Box 4, Canberra, ACT 0200, Australia
Meirelles, Tamara
Mabbitt, Peter D.
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Australian Natl Univ, Res Sch Chem, GPO Box 4, Canberra, ACT 0200, AustraliaAustralian Natl Univ, Res Sch Chem, GPO Box 4, Canberra, ACT 0200, Australia
Mabbitt, Peter D.
Fraser, Nicholas J.
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Australian Natl Univ, Res Sch Chem, GPO Box 4, Canberra, ACT 0200, AustraliaAustralian Natl Univ, Res Sch Chem, GPO Box 4, Canberra, ACT 0200, Australia
Fraser, Nicholas J.
Weik, Martin
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Univ Josef Fourier, CNRS, Commisariat Energie Atom, Inst Biol Struct Jean Pierre Ebel, 41 Rue Jules Horowitz, F-38027 Grenoble, FranceAustralian Natl Univ, Res Sch Chem, GPO Box 4, Canberra, ACT 0200, Australia
Weik, Martin
Jackson, Colin J.
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Australian Natl Univ, Res Sch Chem, GPO Box 4, Canberra, ACT 0200, AustraliaAustralian Natl Univ, Res Sch Chem, GPO Box 4, Canberra, ACT 0200, Australia