Wavelet-Based Time Series Analysis of Circadian Rhythms

被引:65
|
作者
Leise, Tanya L. [1 ]
Harrington, Mary E. [2 ]
机构
[1] Amherst Coll, Dept Math, Amherst, MA 01002 USA
[2] Smith Coll, Neurosci Program, Northampton, MA 01063 USA
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
wheel running; SCN; period variability; amplitude variability; frequency bands; discrete wavelet transform; analytic wavelet transform; WHEEL-RUNNING ACTIVITY; CONSTANT LIGHT; ESTRUS CYCLE; ESTRADIOL; PERIOD;
D O I
10.1177/0748730411416330
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Analysis of circadian oscillations that exhibit variability in period or amplitude can be accomplished through wavelet transforms. Wavelet-based methods can also be used quite effectively to remove trend and noise from time series and to assess the strength of rhythms in different frequency bands, for example, ultradian versus circadian components in an activity record. In this article, we describe how to apply discrete and continuous wavelet transforms to time series of circadian rhythms, illustrated with novel analyses of 2 case studies involving mouse wheel-running activity and oscillations in PER2::LUC bioluminescence from SCN explants.
引用
收藏
页码:454 / 463
页数:10
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