Transposable Elements in a Marginal Population of Aegilops speltoides: Temporal Fluctuations Provide New Insights into Genome Evolution of Wild Diploid Wheat

被引:1
|
作者
Belyayev, Alexander [1 ]
Raskina, Olga [1 ]
机构
[1] Univ Haifa, Inst Evolut, Lab Plant Mol Cytogenet, IL-31905 Haifa, Israel
关键词
SPECIATION;
D O I
10.1007/978-3-642-20763-1_18
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
The Middle East is considered the primary center of cereal species variability that resulted from Pleistocene/Holocene climatic fluctuations. It is now on record that environmentally sensitive transposable elements (TE) may be among the most important internal sources for genotypic population change. Thus, we explore the temporal dynamics of several TEs in individual genotypes from a small, marginal population of Aegilops speltoides. The population is characterized by high heteromorphy and possesses a wide spectrum of chromosomal abnormalities. The dynamics of the TE complex was traced in three morphologically different genotypes and their progeny. It was discovered that: (1) various families of TEs vary tremendously in copy number between individuals from the same population and the selfed progenies; (2) the fluctuations in copy number are TE-family specific; (3) there is a great difference in TE copy number expansion or contraction between gametophytes and sporophytes; and (4) a small percentage of TEs that increase in copy number can actually insert at novel locations. We hypothesize that TE dynamics could promote or intensify morphological and karyotypical changes, some of which may be potentially important for the process of microevolution and allow species with plastic genomes to survive as new forms or even species in times of rapid climatic change.
引用
收藏
页码:313 / 324
页数:12
相关论文
共 10 条
  • [1] Transposable elements in a marginal plant population: temporal fluctuations provide new insights into genome evolution of wild diploid wheat
    Alexander Belyayev
    Ruslan Kalendar
    Leonid Brodsky
    Eviatar Nevo
    Alan H Schulman
    Olga Raskina
    Mobile DNA, 1
  • [2] Transposable elements in a marginal plant population: temporal fluctuations provide new insights into genome evolution of wild diploid wheat
    Belyayev, Alexander
    Kalendar, Ruslan
    Brodsky, Leonid
    Nevo, Eviatar
    Schulman, Alan H.
    Raskina, Olga
    MOBILE DNA, 2010, 1
  • [3] Diversity of Long Terminal Repeat Retrotransposon Genome Distribution in Natural Populations of the Wild Diploid Wheat Aegilops speltoides
    Hosid, Elena
    Brodsky, Leonid
    Kalendar, Ruslan
    Raskina, Olga
    Belyayev, Alexander
    GENETICS, 2012, 190 (01) : 263 - U412
  • [4] New insights into the origin of the B genome of hexaploid wheat: Evolutionary relationships at the SPA genomic region with the S genome of the diploid relative Aegilops speltoides
    Salse, Jerome
    Chague, Veronique
    Bolot, Stephanie
    Magdelenat, Ghislaine
    Huneau, Cecile
    Pont, Caroline
    Belcram, Harry
    Couloux, Arnaud
    Gardais, Soazic
    Evrard, Aurelie
    Segurens, Beatrice
    Charles, Mathieu
    Ravel, Catherine
    Samain, Sylvie
    Charmet, Gilles
    Boudet, Nathalie
    Chalhoub, Boulos
    BMC GENOMICS, 2008, 9 (1)
  • [5] New insights into the origin of the B genome of hexaploid wheat: Evolutionary relationships at the SPA genomic region with the S genome of the diploid relative Aegilops speltoides
    Jérome Salse
    Véronique Chagué
    Stéphanie Bolot
    Ghislaine Magdelenat
    Cécile Huneau
    Caroline Pont
    Harry Belcram
    Arnaud Couloux
    Soazic Gardais
    Aurélie Evrard
    Béatrice Segurens
    Mathieu Charles
    Catherine Ravel
    Sylvie Samain
    Gilles Charmet
    Nathalie Boudet
    Boulos Chalhoub
    BMC Genomics, 9
  • [6] Genome-wide analyses of miniature inverted-repeat transposable elements reveals new insights into the evolution of the Triticum-Aegilops group
    Keidar-Friedman, Danielle
    Bariah, Inbar
    Kashkush, Khalil
    PLOS ONE, 2018, 13 (10):
  • [7] Genomes of Aegilops umbellulata provide new insights into unique structural variations and genetic diversity in the U-genome for wheat improvement
    Singh, Jatinder
    Gudi, Santosh
    Maughan, Peter J.
    Liu, Zhaohui
    Kolmer, James
    Wang, Meinan
    Chen, Xianming
    Rouse, Matthew N.
    Lasserre-Zuber, Pauline
    Rimbert, Helene
    Sehgal, Sunish
    Fiedler, Jason D.
    Choulet, Frederic
    Acevedo, Maricelis
    Gupta, Rajeev
    Gill, Upinder
    PLANT BIOTECHNOLOGY JOURNAL, 2024, 22 (12) : 3505 - 3519
  • [8] Population structure of wild wheat D-genome progenitor Aegilops tauschii Coss.: implications for intraspecific lineage diversification and evolution of common wheat
    Mizuno, Nobuyuki
    Yamasaki, Masanori
    Matsuoka, Yoshihiro
    Kawahara, Taihachi
    Takumi, Shigeo
    MOLECULAR ECOLOGY, 2010, 19 (05) : 999 - 1013
  • [9] Genome assembly of wild loquat (Eriobotrya japonica) and resequencing provide new insights into the genomic evolution and fruit domestication in loquat
    Jing, Danlong
    Liu, Xinya
    He, Qiao
    Dang, Jiangbo
    Hu, Ruoqian
    Xia, Yan
    Wu, Di
    Wang, Shuming
    Zhang, Yin
    Xia, Qingqing
    Zhang, Chi
    Yu, Yuanhui
    Guo, Qigao
    Liang, Guolu
    HORTICULTURE RESEARCH, 2023, 10 (02)
  • [10] Diploid chromosome-level reference genome and population genomic analyses provide insights into Gypenoside biosynthesis and demographic evolution of Gynostemma pentaphyllum (Cucurbitaceae)
    Zhang, Xiao
    Zhao, Yuhe
    Kou, Yixuan
    Chen, Xiaodan
    Yang, Jia
    Zhang, Hao
    Zhao, Zhe
    Zhao, Yuemei
    Zhao, Guifang
    Li, Zhonghu
    HORTICULTURE RESEARCH, 2023, 10 (01)