Long non-coding RNAs and splicing

被引:8
|
作者
Stanek, David [1 ]
机构
[1] Czech Acad Sci, Inst Mol Genet, Prague, Czech Republic
来源
NON-CODING GENOME | 2021年 / 65卷 / 04期
关键词
MESSENGER-RNA; GENE-EXPRESSION; EVOLUTION; TRANSCRIPTION; INTRONS; GENOME; INEFFICIENT; RECRUITMENT; SELECTION; PATTERNS;
D O I
10.1042/EBC20200087
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
In this review I focus on the role of splicing in long non-coding RNA (lncRNA) life. First, I summarize differences between the splicing efficiency of protein-coding genes and lncRNAs and discuss why non-coding RNAs are spliced less efficiently. In the second half of the review, I speculate why splice sites are the most conserved sequences in lncRNAs and what additional roles could splicing play in lncRNA metabolism. I discuss the hypothesis that the splicing machinery can, besides its dominant role in intron removal and exon joining, protect cells from undesired transcripts.
引用
收藏
页码:723 / 729
页数:7
相关论文
共 50 条
  • [1] Role of PININ in the Regulation of Alternative Splicing of Long Non-coding RNAs
    Joo, Jeong-Hoon
    Sugrue, Stephen
    [J]. INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2013, 54 (15)
  • [2] Splicing efficiency and sub-cellular localization of coding and long non-coding RNAs
    Zuckerman, B.
    Ulitsky, I.
    [J]. FEBS JOURNAL, 2017, 284 : 295 - 296
  • [3] Behind the curtain of non-coding RNAs; long non-coding RNAs regulating hepatocarcinogenesis
    El Khodiry, Aya
    Afify, Menna
    El Tayebi, Hend M.
    [J]. WORLD JOURNAL OF GASTROENTEROLOGY, 2018, 24 (05) : 549 - 572
  • [4] Behind the curtain of non-coding RNAs;long non-coding RNAs regulating hepatocarcinogenesis
    Aya El Khodiry
    Menna Afify
    Hend M El Tayebi
    [J]. World Journal of Gastroenterology, 2018, (05) : 549 - 572
  • [5] Role of Non-Coding RNAs in Colorectal Cancer: Focus on Long Non-Coding RNAs
    Lulli, Matteo
    Napoli, Cristina
    Landini, Ida
    Mini, Enrico
    Lapucci, Andrea
    [J]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 23 (21)
  • [6] Long non-coding RNAs are involved in alternative splicing and promote cancer progression
    Jiawei Ouyang
    Yu Zhong
    Yijie Zhang
    Liting Yang
    Pan Wu
    Xiangchan Hou
    Fang Xiong
    Xiayu Li
    Shanshan Zhang
    Zhaojian Gong
    Yi He
    Yanyan Tang
    Wenling Zhang
    Bo Xiang
    Ming Zhou
    Jian Ma
    Yong Li
    Guiyuan Li
    Zhaoyang Zeng
    Can Guo
    Wei Xiong
    [J]. British Journal of Cancer, 2022, 126 : 1113 - 1124
  • [7] Long non-coding RNAs are involved in alternative splicing and promote cancer progression
    Ouyang, Jiawei
    Zhong, Yu
    Zhang, Yijie
    Yang, Liting
    Wu, Pan
    Hou, Xiangchan
    Xiong, Fang
    Li, Xiayu
    Zhang, Shanshan
    Gong, Zhaojian
    He, Yi
    Tang, Yanyan
    Zhang, Wenling
    Xiang, Bo
    Zhou, Ming
    Ma, Jian
    Li, Yong
    Li, Guiyuan
    Zeng, Zhaoyang
    Guo, Can
    Xiong, Wei
    [J]. BRITISH JOURNAL OF CANCER, 2022, 126 (08) : 1113 - 1124
  • [8] Long Non-coding RNAs in the Cytoplasm
    Farooq Rashid
    Abdullah Shah
    Ge Shan
    [J]. Genomics,Proteomics & Bioinformatics, 2016, (02) : 73 - 80
  • [9] Long non-coding RNAs in cancer
    ZhaoJian Gong
    ShanShan Zhang
    WenLing Zhang
    HongBin Huang
    Qiao Li
    Hao Deng
    Jian Ma
    Ming Zhou
    JuanJuan Xiang
    MingHua Wu
    XiaYu Li
    Wei Xiong
    XiaoLing Li
    Yong Li
    ZhaoYang Zeng
    GuiYuan Li
    [J]. Science China Life Sciences, 2012, 55 : 1120 - 1124
  • [10] Long non-coding RNAs in metastasis
    Qihong Huang
    Jinchun Yan
    Reuven Agami
    [J]. Cancer and Metastasis Reviews, 2018, 37 : 75 - 81