Long RNA-Mediated Chromatin Regulation in Fission Yeast and Mammals

被引:3
|
作者
Faber, Matthew W. [1 ]
Vo, Tommy V. [1 ]
机构
[1] Michigan State Univ, Coll Human Med, Dept Biochem & Mol Biol, E Lansing, MI 48824 USA
关键词
long noncoding RNA; long regulatory RNA; chromatin; gene neighborhood; heterochromatin; higher-order chromosomal architecture; YTH-family protein; S; pombe; mouse; human; GENE-EXPRESSION; NONCODING RNAS; HISTONE TURNOVER; MESSENGER-RNAS; M(6)A RNA; HETEROCHROMATIN; TRANSCRIPTION; PROMOTES; REVEALS; SITES;
D O I
10.3390/ijms23020968
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
As part of a complex network of genome control, long regulatory RNAs exert significant influences on chromatin dynamics. Understanding how this occurs could illuminate new avenues for disease treatment and lead to new hypotheses that would advance gene regulatory research. Recent studies using the model fission yeast Schizosaccharomyces pombe (S. pombe) and powerful parallel sequencing technologies have provided many insights in this area. This review will give an overview of key findings in S. pombe that relate long RNAs to multiple levels of chromatin regulation: histone modifications, gene neighborhood regulation in cis and higher-order chromosomal ordering. Moreover, we discuss parallels recently found in mammals to help bridge the knowledge gap between the study systems.
引用
收藏
页数:17
相关论文
共 50 条
  • [1] RNA-mediated regulation of chromatin structures
    Youngtae Kwon
    Yun Doo Chung
    [J]. Genes & Genomics, 2020, 42 : 609 - 617
  • [2] RNA-mediated regulation of chromatin structures
    Kwon, Youngtae
    Chung, Yun Doo
    [J]. GENES & GENOMICS, 2020, 42 (06) : 609 - 617
  • [3] RNA-Mediated Regulation of Meiosis in Budding Yeast
    Pondugala, Vidya Vardhini
    Mishra, Krishnaveni
    [J]. NON-CODING RNA, 2022, 8 (06)
  • [4] Double-stranded RNA-mediated gene silencing in fission yeast
    Raponi, M
    Arndt, GM
    [J]. NUCLEIC ACIDS RESEARCH, 2003, 31 (15) : 4481 - 4489
  • [5] RNA-mediated regulation of heterochromatin
    Johnson, Whitney L.
    Straight, Aaron F.
    [J]. CURRENT OPINION IN CELL BIOLOGY, 2017, 46 : 102 - 109
  • [6] Long non-coding RNA-mediated transcriptional interference of a permease gene confers drug tolerance in fission yeast
    Ryan Ard
    Pin Tong
    Robin C. Allshire
    [J]. Nature Communications, 5
  • [7] Long non-coding RNA-mediated transcriptional interference of a permease gene confers drug tolerance in fission yeast
    Ard, Ryan
    Tong, Pin
    Allshire, Robin C.
    [J]. NATURE COMMUNICATIONS, 2014, 5
  • [8] THE ADE6 GENE OF THE FISSION YEAST AS A TARGET FOR ANTISENSE AND RIBOZYME RNA-MEDIATED SUPPRESSION
    ATKINS, D
    PATRIKAKIS, M
    IZANT, JG
    [J]. ANTISENSE RESEARCH AND DEVELOPMENT, 1995, 5 (04): : 295 - 305
  • [9] Dominant genetic screen for cofactors that enhance antisense RNA-mediated gene silencing in fission yeast
    Raponi, M
    Arndt, GM
    [J]. NUCLEIC ACIDS RESEARCH, 2002, 30 (11) : 2546 - 2554
  • [10] RNA-mediated heterochromatin formation at repetitive elements in mammals
    Stamidis, Nikolaos
    Zylicz, Jan Jakub
    [J]. EMBO JOURNAL, 2023, 42 (08):