Greenhouse-based vegetable high-throughput phenotyping platform and trait evaluation for large-scale lettuces

被引：14
|
作者：
Du, Jianjun [1 ,2 ]
Fan, Jiangchuan [1 ,2 ]
Wang, Chuanyu [1 ,2 ]
Lu, Xianju [1 ,2 ]
Zhang, Ying [1 ,2 ]
Wen, Weiliang [1 ,2 ]
Liao, Shengjin [1 ,2 ]
Yang, Xiaozeng [1 ,3 ]
Guo, Xinyu [1 ,2 ]
Zhao, Chunjiang [1 ,2 ]
机构：
[1] Beijing Acad Agr & Forestry Sci, Beijing, Peoples R China
[2] Beijing Res Ctr Informat Technol Agr, Beijing Key Lab Digital Plant, Beijing, Peoples R China
[3] Beijing Agrobiotechnol Res Ctr, Beijing Key Lab Agr Genet Resources & Biotechnol, Beijing, Peoples R China
来源：
COMPUTERS AND ELECTRONICS IN AGRICULTURE | 2021年 / 186卷
基金：
中国国家自然科学基金;
关键词：
Phenotyping platform; Lettuce; Image-based traits; PCA; Trait heritability; PLANT; IDENTIFICATION; RESPONSES; INDEXES; SOIL;
D O I：
10.1016/j.compag.2021.106193
中图分类号：
S [农业科学];
学科分类号：
09 ;
摘要：
Large-scale screening and assessment of lettuce resources are valuable to help discover significant traits and assist in genetic breeding. In this research, a greenhouse-based vegetable high-throughput phenotyping platform (VHPP) was established to evaluate the multidimensional characteristics of various lettuce varieties. The platform contains an imaging unit with four degrees of freedom (DOFs) to cruise on the crop overhead for image acquisition. The platform also has an automated global semantic phenotyping pipeline (GSPP) for locating pots in sequential images and matching each plant at different growth points. Multidimensional image-based traits were automatically extracted and classified into six categories, including geometry, structure, texture, color, color moment and color indices. We calculated and evaluated 63 static traits (ST) and 189 dynamic traits (DT) by principal component (PC), correlation and heritability analysis, and new PCs provided valuable perspective in describing the lettuce canopy. The results demonstrated the ability of a phenotyping system and pipeline to rapidly investigate and evaluate the growth status of thousands of vegetables. Besides, we identified lots of valuable traits that could be of positive significance in revealing the genetic basis of complex features and exploring the excellent attributes for use in the large-scale lettuce screening and assessment.
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页数：13
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