Adaptive approximation of the boundary surface of a neuron in confocal microscopy volumetric images

被引:17
|
作者
Wang, L [1 ]
Bai, J [1 ]
Ying, K [1 ]
机构
[1] Tsinghua Univ, Dept Biomed Engn, Inst Biomed Engn, Beijing, Peoples R China
关键词
boundary surface; neuron; confocal microscopy volumetric image; biomedical visualisation; isosurface algorithm; adaptive approximation;
D O I
10.1007/BF02345324
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
In biomedical visualisation, the isosurface is usually used to represent (approximate) the boundary surface of the structure within biomedical volumetric images. However, in many confocal microscopy volumetric images of neurons, the grey values of the object and/or background are usually uneven. Therefore a fixed isosurface is not suitable for use in approximating the boundary surface of the neuron. A method is proposed to construct the adaptively approximating surface of the boundary surface of the neuron. In this method, the boundary surface of the neuron could be locally and adaptively approximated with different surface patches in different local regions. Consequently, the approximation accuracy has been considerably improved.
引用
收藏
页码:601 / 607
页数:7
相关论文
共 50 条
  • [1] Adaptive approximation of the boundary surface of a neuron in confocal microscopy volumetric images
    L. Wang
    J. Bai
    K. Ying
    [J]. Medical and Biological Engineering and Computing, 2003, 41 : 601 - 607
  • [2] Comprehensive volumetric confocal microscopy with adaptive focusing
    Kang, DongKyun
    Yoo, Hongki
    Jillella, Priyanka
    Bouma, Brett E.
    Tearney, Guillermo J.
    [J]. BIOMEDICAL OPTICS EXPRESS, 2011, 2 (06): : 1412 - 1422
  • [3] Adaptive Cell Segmentation and Tracking for Volumetric Confocal Microscopy Images of a Developing Plant Meristem
    Liu, Min
    Chakraborty, Anirban
    Singh, Damanpreet
    Yadav, Ram Kishor
    Meenakshisundaram, Gopi
    Reddy, G. Venugopala
    Roy-Chowdhury, Amit
    [J]. MOLECULAR PLANT, 2011, 4 (05) : 922 - 931
  • [4] Detection of the optimal neuron traces in confocal microscopy images
    Vasilkoski, Zlatko
    Stepanyants, Armen
    [J]. JOURNAL OF NEUROSCIENCE METHODS, 2009, 178 (01) : 197 - 204
  • [5] LOCAL NEURON RADIUS ESTIMATION IN VOLUMETRIC MICROSCOPY IMAGES
    Liu, Min
    Liu, Keran
    Wang, Chao
    Luo, Huiqiong
    [J]. 2018 25TH IEEE INTERNATIONAL CONFERENCE ON IMAGE PROCESSING (ICIP), 2018, : 3848 - 3852
  • [6] Three Dimensional Reconstruction of Neuron Morphology from Confocal Microscopy Images
    Fanti, Zian
    Elena Martinez-Perez, M.
    [J]. OPTICS, PHOTONICS, AND DIGITAL TECHNOLOGIES FOR MULTIMEDIA APPLICATIONS, 2010, 7723
  • [7] Automatic Neuron Tracing in Volumetric Microscopy Images with Anisotropic Path Searching
    Xie, Jun
    Zhao, Ting
    Lee, Tzumin
    Myers, Eugene
    Peng, Hanchuan
    [J]. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2010, PT II,, 2010, 6362 : 472 - 479
  • [8] 3D Neuron Tip Detection in Volumetric Microscopy Images
    Liu, Min
    Peng, Hanchuan
    Roy-Chowdhury, Amit K.
    Myers, Eugene
    [J]. 2011 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM 2011), 2011, : 366 - 371
  • [9] Adaptive penalty likelihood for reconstruction of multidimensional confocal microscopy images
    Zhu, D
    Razaz, M
    Lee, R
    [J]. COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 2005, 29 (05) : 319 - 331
  • [10] 3D neuron tip detection in volumetric microscopy images using an adaptive ray-shooting model
    Liu, Min
    Gong, Rong
    Chen, Weixun
    Peng, Hanchuan
    [J]. PATTERN RECOGNITION, 2018, 75 : 263 - 271