Genetic blueprint of the zoonotic pathogen Toxocara canis

被引:93
|
作者
Zhu, Xing-Quan [1 ,2 ]
Korhonen, Pasi K. [2 ]
Cai, Huimin [3 ]
Young, Neil D. [2 ]
Nejsum, Peter
von Samson-Himmelstjerna, Georg [5 ]
Boag, Peter R. [4 ,6 ]
Tan, Patrick [7 ,8 ]
Li, Qiye [3 ]
Min, Jiumeng [3 ]
Yang, Yulan [3 ]
Wang, Xiuhua [3 ]
Fang, Xiaodong [3 ]
Hall, Ross S. [2 ]
Hofmann, Andreas [9 ]
Sternberg, Paul W. [10 ]
Jex, Aaron R. [2 ]
Gasser, Robin B. [2 ]
机构
[1] Chinese Acad Agr Sci, State Key Lab Vet Etiol Biol, Key Lab Vet Parasitol Gansu Prov, Lanzhou Vet Res Inst, Lanzhou 730046, Gansu, Peoples R China
[2] Univ Melbourne, Fac Vet & Agr Sci, Melbourne, Vic 3010, Australia
[3] BGI, Shenzhen 518083, Peoples R China
[4] Univ Copenhagen, Dept Vet Dis Biol, DK-2200 Copenhagen, Denmark
[5] Free Univ Berlin, Inst Parasitol & Trop Vet Med, D-14163 Berlin, Germany
[6] Monash Univ, Dept Biochem & Mol Biol, Clayton, Vic 3800, Australia
[7] Duke NUS Grad Med Sch, Canc & Stem Cell Biol, Singapore 138672, Singapore
[8] Genome Inst Singapore, Singapore 138672, Singapore
[9] Griffith Univ, Eskitis Inst, Struct Chem Program, Brisbane, Qld 4111, Australia
[10] CALTECH, HHMI, Div Biol, Pasadena, CA 91125 USA
来源
NATURE COMMUNICATIONS | 2015年 / 6卷
基金
英国医学研究理事会; 澳大利亚研究理事会; 对外科技合作项目(国际科技项目);
关键词
ASCARIS; IDENTIFICATION; EXPRESSION; PREDICTION; GENOME; RNA; TECHNOLOGIES; VETERINARY; RESISTANCE; INFECTION;
D O I
10.1038/ncomms7145
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Toxocara canis is a zoonotic parasite of major socioeconomic importance worldwide. In humans, this nematode causes disease (toxocariasis) mainly in the under-privileged communities in developed and developing countries. Although relatively well studied from clinical and epidemiological perspectives, to date, there has been no global investigation of the molecular biology of this parasite. Here we use next-generation sequencing to produce a draft genome and transcriptome of T. canis to support future biological and biotechnological investigations. This genome is 317Mb in size, has a repeat content of 13.5% and encodes at least 18,596 protein-coding genes. We study transcription in a larval, as well as adult female and male stages, characterize the parasite's gene-silencing machinery, explore molecules involved in development or host-parasite interactions and predict intervention targets. The draft genome of T. canis should provide a useful resource for future molecular studies of this and other, related parasites.
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页数:8
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