The complete chloroplast genome sequence of Melampyrum koreanum (Orobanchaceae), an endemic and hemi-parasitic herb in Korea

被引:1
|
作者
Jin, Dong-Pil [1 ]
Kim, Jin-Seok [2 ]
Ku, Yeon-Bong [1 ]
Lim, Chae Eun [1 ]
机构
[1] Natl Inst Biol Resources, Plant Resources Div, Incheon, South Korea
[2] Geumsugangsan, Uijongbu, South Korea
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2021年 / 6卷 / 11期
关键词
Chloroplast genome; hemi-parasite; Melampyrum; Orobanchaceae; phylogenetic analysis;
D O I
10.1080/23802359.2021.1984330
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Melampyrum koreanum K.-J. Kim and S.-M. Yun 2012 (Orobanchaceae) is a hemi-parasitic herb, endemic to Korea. Here, the chloroplast genome of this species is reported. It was found to be 143,865 bp long, with a large single-copy region of 83,133 bp, a small single-copy region of 10,308 bp, and a pair of inverted repeat regions of 25,212 bp each. The chloroplast genome harbors 124 genes, including 79 protein-coding genes, 37 transfer RNA genes, and eight ribosomal RNA genes. Among the identified genes, rpoA and several ndh genes were determined to be pseudogenized due to the stop codon in the middle of the gene. The phylogenetic tree of the family was reconstructed based on 20 protein-coding genes, conserved across studied taxa. As a result, Melampyrum L. 1753 species were found to form a monophyletic group in the family.
引用
收藏
页码:3122 / 3124
页数:3
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