An integrated ligand-based modelling approach to explore the structure-property relationships of influenza endonuclease inhibitors

被引:11
|
作者
Amin, Sk. Abdul [1 ,2 ]
Adhikari, Nilanjan [1 ]
Gayen, Shovanlal [2 ]
Jha, Tarun [1 ]
机构
[1] Jadavpur Univ, Dept Pharmaceut Technol, Nat Sci Lab, Div Med & Pharmaceut Chem, POB 17020, Kolkata 700032, WB, India
[2] Dr Hari Singh Gour Vishwavidyalaya, Dept Pharmaceut Sci, Lab Drug Design & Discovery, Sagar 470003, MP, India
关键词
Influenza endonuclease inhibitors; Bayesian classification modelling; HQSAR; CoMSIA; Open3DQSAR; Pharmacophore mapping; RECEPTOR-BINDING AFFINITIES; VIRUS PA ENDONUCLEASE; ANTIPROLIFERATIVE AGENTS; EXTERNAL VALIDATION; PROMOTER-BINDING; COMPARATIVE QSAR; RNA-POLYMERASE; QSPR MODELS; COMFA; IDENTIFICATION;
D O I
10.1007/s11224-017-0933-z
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Influenza endonuclease plays important role in the viral transcription and translation processes. Inhibition of endonuclease enzyme may be an interesting choice to restrict influenza infection. This current study deals with validated multi-chemometric modelling approaches namely regression-based and classification-based quantitative structure-activity relationships (QSARs), hologram QSAR, comparative molecular similarity analysis (CoMSIA), Open3DQSAR study and pharmacophore mapping to identify the structural and physicochemical requirements along with the chemico-biological interactions of pyridinones and pyranones for anti-endonuclease activity. The results suggest that the pyridinone scaffold is more preferable than the pyranone ring. The keto function at 4th position and aryl tetrazole substitution at 1st position of the parent moiety may be important for endonuclease inhibition. Hydroxyl group at 5th position of the parent ring may act as hydrogen bond acceptor feature. The steric substituent is suitable at 2nd position whereas hydrophobic substitution is found to be unfavourable at this position. Bulky hydrophobic substituents are not preferred at the 3rd position of the parent moiety. The information revealed from these integrated ligand-based modelling methods may provide useful informations for designing newer potential anti-influenza agents in future.
引用
收藏
页码:1663 / 1678
页数:16
相关论文
共 50 条
  • [1] An integrated ligand-based modelling approach to explore the structure-property relationships of influenza endonuclease inhibitors
    Sk. Abdul Amin
    Nilanjan Adhikari
    Shovanlal Gayen
    Tarun Jha
    Structural Chemistry, 2017, 28 : 1663 - 1678
  • [2] Modelling of the structure-property relationships in the α-quartz structures
    Yao, Yongtao
    Alderson, Kim
    Alderson, Andrew
    Leng, Jinsong
    NANOSENSORS, BIOSENSORS, AND INFO-TECH SENSORS AND SYSTEMS 2013, 2013, 8691
  • [3] MODELLING OF THE STRUCTURE-PROPERTY RELATIONSHIPS IN AUXETIC NANOTUBE
    Yao, Yongtao
    Alderson, Andrew
    Alderson, Kim Lesley
    Leng, Jinsong
    PROCEEDINGS OF THE ASME CONFERENCE ON SMART MATERIALS, ADAPTIVE STRUCTURES AND INTELLIGENT SYSTEMS, VOL 1, 2012, : 213 - 217
  • [4] Structure- and Ligand-Based Structure-Activity Relationships for a Series of Inhibitors of Aldolase
    Ferreira, Leonardo G.
    Andricopulo, Adriano D.
    CURRENT COMPUTER-AIDED DRUG DESIGN, 2012, 8 (04) : 309 - 316
  • [5] An integrated QSAR modeling approach to explore the structure-property and selectivity relationships of N-benzoyl-L-biphenylalanines as integrin antagonists
    Amin, Sk. Abdul
    Adhikari, Nilanjan
    Bhargava, Sonam
    Gayen, Shovanlal
    Jha, Tarun
    MOLECULAR DIVERSITY, 2018, 22 (01) : 129 - 158
  • [6] GRAPH THEORETICAL APPROACH TO STRUCTURE-PROPERTY RELATIONSHIPS
    RANDIC, M
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1991, 202 : 18 - COMP
  • [7] Structure-property relationships of photoresponsive inhibitors of the kinesin motor
    Amrutha, Ammathnadu S.
    Kumar, K. R. Sunil
    Matsuo, Kazuya
    Tamaoki, Nobuyuki
    ORGANIC & BIOMOLECULAR CHEMISTRY, 2016, 14 (30) : 7202 - 7210
  • [8] The Structure-property Relationships of Clinically Approved Protease Inhibitors
    Choi, Kihang
    CURRENT MEDICINAL CHEMISTRY, 2024, 31 (12) : 1441 - 1463
  • [9] Materials informatics approach using domain modelling for exploring structure-property relationships of polymers
    Hara, Koki
    Yamada, Shunji
    Kurotani, Atsushi
    Chikayama, Eisuke
    Kikuchi, Jun
    SCIENTIFIC REPORTS, 2022, 12 (01)
  • [10] Sighting of tankyrase inhibitors by structure- and ligand-based screening and in vitro approach
    Kirubakaran, Palani
    Arunkumar, Pitchaimani
    Premkumar, Kumpati
    Muthusamy, Karthikeyan
    MOLECULAR BIOSYSTEMS, 2014, 10 (10) : 2699 - 2712