Removing striping artifacts in light-sheet fluorescence microscopy: a review

被引:28
|
作者
Ricci, Pietro [1 ,2 ]
Gavryusev, Vladislav [1 ,2 ]
Mullenbroich, Caroline [3 ]
Turrini, Lapo [1 ,2 ]
de Vito, Giuseppe [1 ,4 ]
Silvestri, Ludovico [1 ,2 ,5 ]
Sancataldo, Giuseppe [6 ]
Pavone, Francesco Saverio [1 ,2 ,5 ]
机构
[1] European Lab Nonlinear Spect, I-50019 Sesto Fiorentino, Italy
[2] Univ Florence, Dept Phys & Astron, I-50019 Sesto Fiorentino, Italy
[3] Univ Glasgow, Sch Phys & Astron, Glasgow G12 8QQ, Lanark, Scotland
[4] Univ Florence, Dept Neurosci Psychol Drug Res & Child Hlth, I-50139 Florence, Italy
[5] CNR, Natl Inst Opt, I-50019 Sesto Fiorentino, Italy
[6] Univ Palermo, Dept Phys & Chem, I-90128 Palermo, Italy
基金
欧盟地平线“2020”;
关键词
Light-sheet microscopy; Striping; 3D microscopy; Brain imaging; BESSEL BEAMS; ILLUMINATION; RESOLUTION; RECONSTRUCTION; DIFFRACTION; TOMOGRAPHY; EXCITATION; REDUCTION; EMBRYOS; MEDIA;
D O I
10.1016/j.pbiomolbio.2021.07.003
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In recent years, light-sheet fluorescence microscopy (LSFM) has found a broad application for imaging of diverse biological samples, ranging from sub-cellular structures to whole animals, both in-vivo and exvivo, owing to its many advantages relative to point-scanning methods. By providing the selective illumination of sample single planes, LSFM achieves an intrinsic optical sectioning and direct 2D image acquisition, with low out-of-focus fluorescence background, sample photo-damage and photo-bleaching. On the other hand, such an illumination scheme is prone to light absorption or scattering effects, which lead to uneven illumination and striping artifacts in the images, oriented along the light sheet propagation direction. Several methods have been developed to address this issue, ranging from fully optical solutions to entirely digital post-processing approaches. In this work, we present them, outlining their advantages, performance and limitations. (c) 2021 The Authors. Published by Elsevier Ltd. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
引用
收藏
页码:52 / 65
页数:14
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