MULTI-CONTRAST DEEP NUCLEI SEGMENTATION USING A PROBABILISTIC ATLAS

被引:7
|
作者
Marrakchi-Kacem, Linda [1 ]
Poupon, Cyril [1 ]
Mangin, Jean-Francois [1 ]
Poupon, Fabrice [1 ]
机构
[1] CEA, F-91191 Gif Sur Yvette, France
关键词
deep nuclei; segmentation; probabilistic atlas; multi-contrast; deformable model; diffusion tensor; IMAGE SEGMENTATION; BRAIN;
D O I
10.1109/ISBI.2010.5490415
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
In this paper we propose a new hybrid segmentation approach of the deep brain structures based on a multi-contrast deformable model of regions in competition, with deformations preserving the topology of the structures, as well as their shape and position, using a probabilistic atlas and some prior morphological information. The accuracy of our method was evaluated by comparing the results obtained on a base of T(1)-weighted data contrast with those of FREESURFER and FSL-FIRST. Besides giving very good results from only one contrast, we show that the multi-contrast aspect of our method allows exploiting the complementary contributions of different contrasts, like T(1) and diffusion tensor (DT) contrasts, in order to provide a more robust segmentation.
引用
收藏
页码:61 / 64
页数:4
相关论文
共 50 条
  • [1] Multi-atlas Segmentation Enables Robust Multi-contrast MRI Spleen Segmentation for Splenomegaly
    Huo, Yuankai
    Liu, Jiaqi
    Xu, Zhoubing
    Harrigan, Robert L.
    Assad, Albert
    Abramson, Richard G.
    Landman, Bennett A.
    [J]. MEDICAL IMAGING 2017: IMAGE PROCESSING, 2017, 10133
  • [2] Automatic Segmentation of brain tumor in multi-contrast magnetic resonance using deep neural network
    Cavieres, Eduardo
    Tejos, Cristian
    Salas, Rodrigo
    Sotelo, Julio
    [J]. 18TH INTERNATIONAL SYMPOSIUM ON MEDICAL INFORMATION PROCESSING AND ANALYSIS, 2023, 12567
  • [3] A multi-contrast MRI approach to thalamus segmentation
    Corona, Veronica
    Lellmann, Jan
    Nestor, Peter
    Schoenlieb, Carola-Bibiane
    Acosta-Cabronero, Julio
    [J]. HUMAN BRAIN MAPPING, 2020, 41 (08) : 2104 - 2120
  • [4] Multi-contrast computed tomography healthy kidney atlas
    Lee, Ho Hin
    Tang, Yucheng
    Xu, Kaiwen
    Bao, Shunxing
    Fogo, Agnes B.
    Harris, Raymond
    Caestecker, Mark P. de
    Heinrich, Mattias
    Spraggins, Jeffrey M.
    Huo, Yuankai
    Landman, Bennett A.
    [J]. COMPUTERS IN BIOLOGY AND MEDICINE, 2022, 146
  • [5] Multi-contrast computed tomography healthy kidney atlas
    Lee, Ho Hin
    Tang, Yucheng
    Xu, Kaiwen
    Bao, Shunxing
    Fogo, Agnes B.
    Harris, Raymond
    de Caestecker, Mark P.
    Heinrich, Mattias
    Spraggins, Jeffrey M.
    Huo, Yuankai
    Landman, Bennett A.
    [J]. Computers in Biology and Medicine, 2022, 146
  • [6] Automatic Segmentation of Multi-contrast MRI Using Statistical Region Merging
    Dvorak, P.
    Bartusek, K.
    Gescheidtova, E.
    [J]. PIERS 2014 GUANGZHOU: PROGRESS IN ELECTROMAGNETICS RESEARCH SYMPOSIUM, 2014, : 1865 - 1869
  • [7] Deep unregistered multi-contrast MRI reconstruction
    Liu, Xinwen
    Wang, Jing
    Jin, Jin
    Li, Mingyan
    Tang, Fangfang
    Crozier, Stuart
    Liu, Feng
    [J]. MAGNETIC RESONANCE IMAGING, 2021, 81 : 33 - 41
  • [8] Multi-contrast MR for enhanced bone imaging and segmentation
    Dalvi, Rupin
    Abugharbieh, Rafeef
    Wilson, Derek C.
    Wilson, David R.
    [J]. 2007 ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY, VOLS 1-16, 2007, : 5620 - +
  • [9] Semi-Supervised Deep Learning for Multi-Tissue Segmentation from Multi-Contrast MRI
    Anwar, Syed Muhammad
    Irmakci, Ismail
    Torigian, Drew A.
    Jambawalikar, Sachin
    Papadakis, Georgios Z.
    Akgun, Can
    Ellermann, Jutta
    Akcakaya, Mehmet
    Bagci, Ulas
    [J]. JOURNAL OF SIGNAL PROCESSING SYSTEMS FOR SIGNAL IMAGE AND VIDEO TECHNOLOGY, 2022, 94 (05): : 497 - 510
  • [10] Semi-Supervised Deep Learning for Multi-Tissue Segmentation from Multi-Contrast MRI
    Syed Muhammad Anwar
    Ismail Irmakci
    Drew A. Torigian
    Sachin Jambawalikar
    Georgios Z. Papadakis
    Can Akgun
    Jutta Ellermann
    Mehmet Akcakaya
    Ulas Bagci
    [J]. Journal of Signal Processing Systems, 2022, 94 : 497 - 510