TG-Net: Combining transformer and GAN for nasopharyngeal carcinoma tumor segmentation based on total-body uEXPLORER PET/CT scanner

被引:10
|
作者
Huang, Zhengyong [1 ,2 ]
Tang, Si [1 ,3 ,4 ]
Chen, Zixiang [1 ]
Wang, Guoshuai [1 ,2 ]
Shen, Hao [1 ,2 ]
Zhou, Yun [5 ]
Wang, Haining [5 ]
Fan, Wei [1 ,3 ,4 ]
Liang, Dong [1 ]
Hu, Yingying [3 ,4 ]
Hu, Zhanli [1 ]
机构
[1] Chinese Acad Sci, Shenzhen Inst Adv Technol, Lauterbur Res Ctr Biomed Imaging, 1068 Xueyuan Ave, Shenzhen 518055, Guangdong, Peoples R China
[2] Univ Chinese Acad Sci, Beijing 101408, Peoples R China
[3] Sun Yat Sen Univ, Canc Ctr, Collaborat Innovat Ctr Canc Med, State Key Lab Oncol South China, Guangzhou 510060, Peoples R China
[4] Sun Yat Sen Univ, Canc Ctr, Dept Nucl Med, Guangzhou 510060, Peoples R China
[5] United Imaging Healthcare Grp, Cent Res Inst, Shanghai 201807, Peoples R China
基金
中国国家自然科学基金;
关键词
Nasopharyngeal carcinoma segmentation; Total-body parametric imaging; uEXPLORER; GAN; Transformer;
D O I
10.1016/j.compbiomed.2022.105869
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Nasopharyngeal carcinoma (NPC) is a malignant tumor, and the main treatment is radiotherapy. Accurate delineation of the target tumor is essential for radiotherapy of NPC. NPC tumors are small in size and vary widely in shape and structure, making it a time-consuming and laborious task for even experienced radiologists to manually outline tumors. However, the segmentation performance of current deep learning models is not satisfactory, mainly manifested by poor segmentation boundaries. To solve this problem, this paper proposes a segmentation method for nasopharyngeal carcinoma based on dynamic PET-CT image data, whose input data include CT, PET, and parametric images (Ki images). This method uses a generative adversarial network with a modified UNet integrated with a Transformer as the generator (TG-Net) to achieve automatic segmentation of NPC on combined CT-PET-Ki images. In the coding stage, TG-Net uses moving windows to replace traditional pooling operations to obtain patches of different sizes, which can reduce information loss in the coding process. Moreover, the introduction of Transformer can make the network learn more representative features and improve the discriminant ability of the model, especially for tumor boundaries. Finally, the results of fivefold cross validation with an average Dice similarity coefficient score of 0.9135 show that our method has good segmentation performance. Comparative experiments also show that our network structure is superior to the most advanced methods in the segmentation of NPC. In addition, this work is the first to use Ki images to assist tumor segmentation. We also demonstrated the usefulness of adding Ki images to aid in tumor segmentation.
引用
收藏
页数:11
相关论文
共 7 条
  • [1] MMCA-NET: A Multimodal Cross Attention Transformer Network for Nasopharyngeal Carcinoma Tumor Segmentation Based on a Total-Body PET/CT System
    Zhao, Wenjie
    Huang, Zhenxing
    Tang, Si
    Li, Wenbo
    Gao, Yunlong
    Hu, Yingying
    Fan, Wei
    Cheng, Chuanli
    Yang, Yongfeng
    Zheng, Hairong
    Liang, Dong
    Hu, Zhanli
    [J]. IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS, 2024, 28 (09) : 5447 - 5458
  • [2] Quantitative accuracy in total-body imaging using the uEXPLORER PET/CT scanner
    Leung, Edwin K.
    Berg, Eric
    Omidvari, Negar
    Spencer, Benjamin A.
    Li, Elizabeth
    Abdelhafez, Yasser G.
    Schmall, Jeffrey P.
    Liu, Weiping
    He, Liuchun
    Tang, Songsong
    Liu, Yilin
    Dong, Yun
    Jones, Terry
    Cherry, Simon R.
    Badawi, Ramsey D.
    [J]. PHYSICS IN MEDICINE AND BIOLOGY, 2021, 66 (20):
  • [3] Development of a Monte Carlo-based scatter correction method for total-body PET using the uEXPLORER PET/CT scanner
    Bayerlein, Reimund
    Spencer, Benjamin A.
    Leung, Edwin K.
    Omidvari, Negar
    Abdelhafez, Yasser G.
    Wang, Qian
    Nardo, Lorenzo
    Cherry, Simon R.
    Badawi, Ramsey D.
    [J]. PHYSICS IN MEDICINE AND BIOLOGY, 2024, 69 (04):
  • [4] A neural network-based method using uEXPLORER total-body PET to optimize the input function for the whole-body PET quantification on conventional PET-CT scanner
    Gu, Wenjian
    Wang, Yihan
    Zheng, Chaojie
    Kang, Fei
    Liu, Jianjun
    Fan, Wei
    Zhou, Yun
    [J]. JOURNAL OF NUCLEAR MEDICINE, 2023, 64
  • [5] Performance Evaluation of the uEXPLORER Total-Body PET/CT Scanner Based on NEMA NU 2-2018 with Additional Tests to Characterize PET Scanners with a Long Axial Field of View
    Spencer, Benjamin A.
    Berg, Eric
    Schmall, Jeffrey P.
    Omidvari, Negar
    Leung, Edwin K.
    Abdelhafez, Yasser G.
    Tang, Songsong
    Deng, Zilin
    Dong, Yun
    Lv, Yang
    Bao, Jun
    Liu, Weiping
    Li, Hongdi
    Jones, Terry
    Badawi, Ramsey D.
    Cherry, Simon R.
    [J]. JOURNAL OF NUCLEAR MEDICINE, 2021, 62 (06) : 861 - 870
  • [6] A personal acquisition time regimen of 68Ga-DOTATATE total-body PET/CT in patients with neuroendocrine tumor (NET): a feasibility study
    Jie Xiao
    Haojun Yu
    Xiuli Sui
    Guobing Liu
    Yanyan Cao
    Zhao Yanzhao
    Yiqiu Zhang
    Pengcheng Hu
    Dengfeng Cheng
    Hongcheng Shi
    [J]. Cancer Imaging, 22
  • [7] A personal acquisition time regimen of 68Ga-DOTATATE total-body PET/CT in patients with neuroendocrine tumor (NET): a feasibility study
    Xiao, Jie
    Yu, Haojun
    Sui, Xiuli
    Liu, Guobing
    Cao, Yanyan
    Yanzhao, Zhao
    Zhang, Yiqiu
    Hu, Pengcheng
    Cheng, Dengfeng
    Shi, Hongcheng
    [J]. CANCER IMAGING, 2022, 22 (01)