Comprehensive network map of interferon gamma signaling

被引:75
|
作者
Bhat, Mohd Younis [1 ,2 ]
Solanki, Hitendra S. [1 ,3 ]
Advani, Jayshree [1 ,4 ]
Khan, Aafaque Ahmad [1 ,3 ]
Prasad, T. S. Keshava [1 ,5 ]
Gowda, Harsha [1 ]
Thiyagarajan, Saravanan [6 ]
Chatterjee, Aditi [1 ]
机构
[1] Inst Bioinformat, Int Technol Pk, Bangalore 560066, Karnataka, India
[2] Amrita Vishwa Vidyapeetham, Sch Biotechnol, Kollam 690525, India
[3] Kalinga Inst Ind Technol, Sch Biotechnol, Bhubaneswar 751024, Odisha, India
[4] Manipal Acad Higher Educ, Manipal 576104, Karnataka, India
[5] Yenepoya Deemed Be Univ, Yenepoya Res Ctr, Ctr Syst Biol & Mol Med, Mangalore 575018, India
[6] Mitra Biotech, Div Canc Biol, Bangalore 560099, Karnataka, India
关键词
Interferon gamma receptor; Signal transducer and activator of transcription; Interferon response factors; Interferon-gamma activated sequence and PathVisio; PHOSPHORYLATION-ACETYLATION SWITCH; MESSENGER-RNA TRANSLATION; IFN-GAMMA; DEPENDENT INDUCTION; COMMUNITY STANDARD; TUMOR-GROWTH; EXPRESSION; PATHWAY; GENE; CARCINOMA;
D O I
10.1007/s12079-018-0486-y
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Interferon gamma (IFN-), is a cytokine, which is an important regulator of host defense system by mediating both innate and adaptive immune responses. IFN- signaling is primarily associated with inflammation and cell-mediated immune responses. IFN- is also represented as antitumor cytokine which facilitates immunosurveillance in tumor cells. In addition, IFN- mediated signaling also elicits pro-tumorigenic transformations and promotes tumor progression. Impact of IFN- signaling in mammalian cells has been widely studied which indicate that IFN- orchestrates distinct cellular functions including immunomodulation, leukocyte trafficking, apoptosis, anti-microbial, and both anti- and pro-tumorigenic role. However, a detailed network of IFN- signaling pathway is currently lacking. Therefore, we systematically curated the literature information pertaining to IFN- signaling and develop a comprehensive signaling network to facilitate better understanding of IFN- mediated signaling. A total of 124 proteins were catalogued that were experimentally proven to be involved in IFN- signaling cascade. These 124 proteins were found to participate in 81 protein-protein interactions, 94 post-translational modifications, 20 translocation events, 54 activation/inhibiton reactions. Further, 236 differential expressed genes were also documented in IFN- mediated signaling. IFN- signaling pathway is made freely available to scientific audience through NetPath at (http://www.netpath.org/pathways?path_id=NetPath_32). We believe that documentation of reactions pertaining to IFN- signaling and development of pathway map will facilitate further research in IFN- associated human diseases including cancer.
引用
收藏
页码:745 / 751
页数:7
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