Spectral Clustering and Feature Selection for Microarray Data

被引:3
|
作者
Garcia-Garcia, Dario [1 ]
Santos-Rodriguez, Raul [1 ]
机构
[1] Univ Carlos III Madrid, Dept Signal Theory & Commun, Leganes, Spain
关键词
MUTUAL INFORMATION;
D O I
10.1109/ICMLA.2009.86
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Microarray datasets comprise a large number of gene expression values and a relatively small number of samples. Feature selection algorithms are very useful in these situations in order to find a compact subset of informative features. We propose a redundancy control method for algorithms in the recently proposed SPEC family of spectral-based feature selection algorithms. This method is applied to find relevant genes in order to cluster samples corresponding to three kinds of cancer: lung, breast and colon.
引用
收藏
页码:425 / 428
页数:4
相关论文
共 50 条
  • [1] Distance based feature selection for clustering microarray data
    Dash, Manoranjan
    Gopalkrishnan, Vivekanand
    [J]. DATABASE SYSTEMS FOR ADVANCED APPLICATIONS, 2008, 4947 : 512 - 519
  • [2] A Clustering Approach for Feature Selection in Microarray Data Classification Using Random forest
    Aydadenta, Husna
    Adiwijaya
    [J]. JOURNAL OF INFORMATION PROCESSING SYSTEMS, 2018, 14 (05): : 1167 - 1175
  • [3] Graph-based unsupervised feature selection and multiview clustering for microarray data
    Swarnkar, Tripti
    Mitra, Pabitra
    [J]. JOURNAL OF BIOSCIENCES, 2015, 40 (04) : 755 - 767
  • [4] Feature Genes Selection of Adult ALL Microarray Data with Affinity Propagation Clustering
    Chuang, Chen-Chia
    Li, Yan-Cheng
    Jeng, Jin-Tsong
    Chang, Chih-Kai
    Wang, Zhi-Qian
    [J]. 2015 IEEE INTERNATIONAL CONFERENCE ON CONSUMER ELECTRONICS - TAIWAN (ICCE-TW), 2015, : 230 - 231
  • [5] Graph-based unsupervised feature selection and multiview clustering for microarray data
    Tripti Swarnkar
    Pabitra Mitra
    [J]. Journal of Biosciences, 2015, 40 : 755 - 767
  • [6] A spectral clustering method for microarray data
    Tritchler, D
    Fallah, S
    Beyene, J
    [J]. COMPUTATIONAL STATISTICS & DATA ANALYSIS, 2005, 49 (01) : 63 - 76
  • [7] Adaptive Data Clustering Ensemble Algorithm Based on Stability Feature Selection and Spectral Clustering
    Li, Zuhong
    Ma, Zhixin
    Ma, Zhicheng
    Yang, Shibo
    [J]. 2019 2ND INTERNATIONAL CONFERENCE ON ARTIFICIAL INTELLIGENCE AND BIG DATA (ICAIBD 2019), 2019, : 277 - 281
  • [8] Prominent feature selection of microarray data
    Yihui Liu School of Computer Science and Information TechnologyShandong Institute of Light IndustryJinan China
    [J]. Progress in Natural Science., 2009, 19 (10) - 1371
  • [9] Prominent feature selection of microarray data
    Yihui Liu School of Computer Science and Information Technology
    [J]. Progress in Natural Science:Materials International, 2009, 19 (10) : 1365 - 1371
  • [10] FEATURE DISCRETIZATION AND SELECTION IN MICROARRAY DATA
    Ferreira, Artur
    Figueiredo, Mario
    [J]. KDIR 2011: PROCEEDINGS OF THE INTERNATIONAL CONFERENCE ON KNOWLEDGE DISCOVERY AND INFORMATION RETRIEVAL, 2011, : 465 - 469