Dilated Residual Learning With Skip Connections for Real-Time Denoising of Laser Speckle Imaging of Blood Flow in a Log-Transformed Domain

被引:14
|
作者
Chen, Weimin [1 ,2 ,3 ,4 ]
Lu, Jinling [1 ,2 ,3 ,4 ]
Zhu, Xuan [1 ,2 ,3 ,4 ]
Hong, Jiachi [1 ,2 ,3 ,4 ]
Liu, Xiaohu [1 ,2 ,3 ,4 ]
Li, Miaowen [1 ,2 ,3 ,4 ]
Li, Pengcheng [3 ,5 ,6 ,7 ,8 ]
机构
[1] Huazhong Univ Sci & Technol, Wuhan Natl Lab Optoelect, Wuhan 430074, Peoples R China
[2] Huazhong Univ Sci & Technol, MoE Key Lab Biomed Photon, Wuhan 430074, Peoples R China
[3] Huazhong Univ Sci & Technol, Sch Engn Sci, Wuhan 430074, Peoples R China
[4] Huazhong Univ Sci & Technol, Britton Chance Ctr Biomed Photon, Wuhan 430074, Peoples R China
[5] Wuhan Huazhong Univ Sci & Technol, Britton Chance Ctr Biomed Photon, Wuhan 430074, Peoples R China
[6] Huazhong Univ Sci & Technol, Natl Lab Optoelect, Wuhan 430074, Peoples R China
[7] Wuhan Huazhong Univ Sci & Technol, MoE Key Lab Biomed Photon, Wuhan 430074, Peoples R China
[8] HUST Suzhou Inst Brainsmat, Suzhou 215125, Peoples R China
基金
中国国家自然科学基金;
关键词
Blood flow; convolutional neural network (CNN); dilated convolution; laser speckle contrast imaging (LSCI); skip connection; CONTRAST; EXPOSURE; SPECTROSCOPY; VISIBILITY; ALGORITHM;
D O I
10.1109/TMI.2019.2953626
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Laser speckle contrast imaging (LSCI) is a wide-field and noncontact imaging technology for mapping blood flow. Although the denoising method based on block-matching and three-dimensional transform-domain collaborative filtering (BM3D) was proposed to improve its signal-to-noise ratio (SNR) significantly, the processing time makes it difficult to realize real-time denoising. Furthermore, it is still difficult to obtain an acceptable level of SNR with a few raw speckle images given the presence of significant noise and artifacts. A feed-forward denoising convolutional neural network (DnCNN) achieves state-of-the-art performance in denoising nature images and is efficiently accelerated by GPU. However, it performs poorly in learning with original speckle contrast images of LSCI owing to the inhomogeneous noise distribution. Therefore, we propose training DnCNN for LSCI in a log-transformed domain to improve training accuracy and it achieves an improvement of 5.13 dB in the peak signal-to-noise ratio (PSNR). To decrease the inference time and improve denoising performance, we further propose a dilated deep residual learning network with skip connections (DRSNet). The image-quality evaluations of DRSNet with five raw speckle images outperform that of spatially average denoising with 20 raw speckle images. DRSNet takes 35 ms (i.e., 28 frames per second) for denoising a blood flow image with $486\times648$ pixels on an NVIDIA 1070 GPU, which is approximately 2.5 times faster than DnCNN. In the test sets, DRSNet also improves 0.15 dB in the PSNR than that of DnCNN. The proposed network shows good potential in real-time monitoring of blood flow for biomedical applications.
引用
收藏
页码:1582 / 1593
页数:12
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